PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006122.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Nin-like

Protein Properties

Length: 519aa MW: 57354.5 Da PI: 8.2976

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006122.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	74.4	1.4e-23	363	413	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k+ sl++l++yF+ +kdAAk++gvc+T+L riCR+yGI WP+Rkik++ Oeu006122.1 363 QKTTSLQVLKQYFAVGLKDAAKNVGVCPTTLTRICRRYGITQWPSRKIKKV 413 577899*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MSVGPNRNPN LTVSVKKALE YLKEFVRDKD GLIQMWLPRL RTDEDSMEFI GLLGPVFLNK 60 LPEWTPDVCF LKDEEYSRIK YAQRIMLEDH LLFQVLNEEV GIAWGCYEHS IAGINRIVFG 120 YSLDRDIVRV RMFFAKTIKE DCSESYQAAL AEIKDILKCA CNTHKLPLAK TWTPRIQQGK 180 SCCRHSNENY ANCVSTIDSA SYVADPLVPG FLEACSEHHL LKGEEVVGKA STTNQPCFSE 240 DITAFSKTEY PLSHHARVLA AVAILLRSIY TGNADFVLEF FLPLNCKNAL DQKKTLDSLS 300 SVLQQACRNL HVITDDELPK TSLPMPDSGP KESAEDSGDC SSVGGHLSSG AKITGQKRRT 360 KTQKTTSLQV LKQYFAVGLK DAAKNVGVCP TTLTRICRRY GITQWPSRKI KKVDRSLRLV 420 IDSIQGGEGG IQLSSFYNKF PELNNLNLPK VGHLSSSKMS GHLQHVNTQP EGSLLSPRTT 480 MSKSPSGSHS SVSSFCCSTG VKQSSSPVNA SSNVDYIS*

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MSVGPNRNPN LTVSVKKALE YLKEFVRDKD GLIQMWLPRL RTDEDSMEFI GLLGPVFLNK  60
LPEWTPDVCF LKDEEYSRIK YAQRIMLEDH LLFQVLNEEV GIAWGCYEHS IAGINRIVFG  120
YSLDRDIVRV RMFFAKTIKE DCSESYQAAL AEIKDILKCA CNTHKLPLAK TWTPRIQQGK  180
SCCRHSNENY ANCVSTIDSA SYVADPLVPG FLEACSEHHL LKGEEVVGKA STTNQPCFSE  240
DITAFSKTEY PLSHHARVLA AVAILLRSIY TGNADFVLEF FLPLNCKNAL DQKKTLDSLS  300
SVLQQACRNL HVITDDELPK TSLPMPDSGP KESAEDSGDC SSVGGHLSSG AKITGQKRRT  360
KTQKTTSLQV LKQYFAVGLK DAAKNVGVCP TTLTRICRRY GITQWPSRKI KKVDRSLRLV  420
IDSIQGGEGG IQLSSFYNKF PELNNLNLPK VGHLSSSKMS GHLQHVNTQP EGSLLSPRTT  480
MSKSPSGSHS SVSSFCCSTG VKQSSSPVNA SSNVDYIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-103	Nin-like family protein