PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005826.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 350aa MW: 39436.1 Da PI: 6.7094

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005826.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00076	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F + L H+r+H Oeu005826.1 4 YRCKLCFRNFANGKALGGHMRSH 26 9*********************9 PP
2	zf-C2H2	13.5	0.00022	217	239	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H Oeu005826.1 217 YRCETCNKVFRSYQALGGHRANH 239 9***********99999998887 PP
3	zf-C2H2	12.2	0.00055	272	294	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++Fs+ L H r+H Oeu005826.1 272 HECPICFRVFSSGQALGGHKRSH 294 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEKYRCKLCF RNFANGKALG GHMRSHMMNF YAAKKQKKVQ THEKDSQSSD DFQLSSSTSE 60 EENGEKEVSC YGLRENPKKS IRFVDPRFFC ASSSVVLQDR ESETESIPNP IFRRCKRIKK 120 TRISVKETEM MKSKFEKGEN TSNEFSDEPL SSISDTPEED VAYCLIMLSR DTWQREQNEE 180 KEEEEEDRER NKYEDDEYSE DSGAVMVAKS TKFGGKYRCE TCNKVFRSYQ ALGGHRANHK 240 KIKVNITAET PPRMVVETGK NGGSIQVEEK IHECPICFRV FSSGQALGGH KRSHFTGGGA 300 ISANVNSINT PPAAAAKPFS RIGETLNIDL NLPAPVEGED EISQLVNFA*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEKYRCKLCF RNFANGKALG GHMRSHMMNF YAAKKQKKVQ THEKDSQSSD DFQLSSSTSE  60
EENGEKEVSC YGLRENPKKS IRFVDPRFFC ASSSVVLQDR ESETESIPNP IFRRCKRIKK  120
TRISVKETEM MKSKFEKGEN TSNEFSDEPL SSISDTPEED VAYCLIMLSR DTWQREQNEE  180
KEEEEEDRER NKYEDDEYSE DSGAVMVAKS TKFGGKYRCE TCNKVFRSYQ ALGGHRANHK  240
KIKVNITAET PPRMVVETGK NGGSIQVEEK IHECPICFRV FSSGQALGGH KRSHFTGGGA  300
ISANVNSINT PPAAAAKPFS RIGETLNIDL NLPAPVEGED EISQLVNFA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-54	C2H2 family protein