PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005771.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 455aa MW: 50169.1 Da PI: 9.1168

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005771.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	60.8	2.2e-19	113	157	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+e grCrRtDG+kWRCs++ l+ +k+CErH+hrgr+ srk++e Oeu005771.1 113 DPELGRCRRTDGRKWRCSNNSLPKEKYCERHMHRGRKCSRKHVER 157 7999**************************************996 PP
2	WRC	62.2	7.8e-20	344	381	1	38
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsr 38 +aep rC+RtDGKkWRCs++v++g+++C +H+hrg +r Oeu005771.1 344 EAEPHRCKRTDGKKWRCSKDVVQGQNYCNSHMHRGTKR 381 589********************************988 PP
3	QLQ	28.7	4e-11	53	89	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FTa+Ql +L Q l++ +a ++PvP + l++i+k Oeu005771.1 53 SSFTAEQLRELYYQTLVFNFIAYGLPVPFHFLLPIWK 89 79*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MHSQTLPAFF LSAGIDAESK KREESSSLVK LELGIAGCGH INPVRQKQEK AESSFTAEQL 60 RELYYQTLVF NFIAYGLPVP FHFLLPIWKS IFQSDPSFTG FSIQNSDHGS MMDPELGRCR 120 RTDGRKWRCS NNSLPKEKYC ERHMHRGRKC SRKHVERSKS DADNEILTSN IINIPSKTIS 180 DPSYDTLTPD IRIKPISSSI PFDLDLTFSS SNPSNGVPAI KHGSNKNHDF IQPTIKACRH 240 NVELKNNLNG DAYNAATITP TRASGKEAIG NSSMKNGNHD SEGKDAGFNN VKARKVQIRN 300 NNVFENNYAG SNSPGFGVSR DSILQSVSSS RCVTLGSLKE TLTEAEPHRC KRTDGKKWRC 360 SKDVVQGQNY CNSHMHRGTK RMVLDSELAN GARFTSQSGC TSQAIPKVAY GSINLNAKPA 420 SPQEFTENKS TSSSDATTIT DENVSTCYTL AISP*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MHSQTLPAFF LSAGIDAESK KREESSSLVK LELGIAGCGH INPVRQKQEK AESSFTAEQL  60
RELYYQTLVF NFIAYGLPVP FHFLLPIWKS IFQSDPSFTG FSIQNSDHGS MMDPELGRCR  120
RTDGRKWRCS NNSLPKEKYC ERHMHRGRKC SRKHVERSKS DADNEILTSN IINIPSKTIS  180
DPSYDTLTPD IRIKPISSSI PFDLDLTFSS SNPSNGVPAI KHGSNKNHDF IQPTIKACRH  240
NVELKNNLNG DAYNAATITP TRASGKEAIG NSSMKNGNHD SEGKDAGFNN VKARKVQIRN  300
NNVFENNYAG SNSPGFGVSR DSILQSVSSS RCVTLGSLKE TLTEAEPHRC KRTDGKKWRC  360
SKDVVQGQNY CNSHMHRGTK RMVLDSELAN GARFTSQSGC TSQAIPKVAY GSINLNAKPA  420
SPQEFTENKS TSSSDATTIT DENVSTCYTL AISP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	2e-25	GRF family protein