PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005680.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 280aa    MW: 30899.5 Da    PI: 9.953
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005680.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.86.1e-1472116347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r   k+Rt+ q+ s+ qky
      Oeu005680.1  72 PWTEEEHRLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 116
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MLFGVRVKVD PMRKSVSMNN LAEYEPVNYN DDKTNANNND NESLKTANGY ASADDAVPQP  60
GNGSRERKRG VPWTEEEHRL FLVGLQKVGK GDWRGISRNY VKTRTPTQVA SHAQKYFIRR  120
NNLNRRRRRS SLFDITTDSV TAIPNKEVTS HQESAAQAIW PPTSLPPAKT SNIGGFPGVP  180
VAPVFLHLQS ENSMENITYG QDNHLNNTLD MRIQPVPVLP KHTSSSMADL SLNQNMPFGS  240
TQLSLGLSLS LDQDPSSTRH SPFQAITSFG NGDRIISVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.21e-53MYB_related family protein