PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005550.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 318aa    MW: 34828.3 Da    PI: 10.1115
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005550.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.41.4e-32127182359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                   +rY+eClkNhAa++Ggh+vDGCgEfmps g+egt++ l+CaAC+CHR+FHR+ev+ 
  Oeu005550.1 127 VIRYRECLKNHAAKMGGHVVDGCGEFMPS-GQEGTPEFLRCAACDCHRSFHRKEVQG 182
                  689*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MEKRGQERDM GIPNFMGYNP SQLNQESPVK LPLAPIVSTP PDRRGNATVS TRRGSAIFSP  60
IQTLDHHRPL PPPPLLPPRA QKDSNPAPDP DLDPVTSPSG VTGGASNSKS SPPPPLQQGQ  120
ESGASTVIRY RECLKNHAAK MGGHVVDGCG EFMPSGQEGT PEFLRCAACD CHRSFHRKEV  180
QGRTNNHRIP VLQSQSPPTM PPQHKYSHTP PVMVAFGRNS GGAAADSSSE DLNINDSSAG  240
GHAMVQPSFS GSKKRFRTKF SQEQKDKMHE LAAKLGWRIQ KQDEQEVLKF CNEVGVKREV  300
FKVWLHNNKQ AMKKRQI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.14e-62ZF-HD family protein