PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005537.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 708aa MW: 79502.6 Da PI: 4.5765

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005537.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.8	2.2e-12	555	598	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r rW++++ el+++a++q+G++ + I + ++ gRt++q+k+++ k Oeu005537.3 555 RVRWSKQDTELFYEAIQQFGTD-LSMIQQLFP-GRTRNQVKLKYKK 598 78******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MAFELDPLDD IFAEDTAKNA RVGGKFQPKA KQKPSRKGSA ATSVSSLQPV PTTDVIEHES 60 SVILKTNKHS EHYSDVFMPD GNCSWQSNFD KSGENGDILL GLESLDDFLP HATADMETIA 120 DGSTPSEAAS ADVPCTKNAG LPIPVISSIN ASTCPQQSAV QDPLTGGEPI ISISYDGDHM 180 DNRVVETEEM DIMDTQVLSD LATSFGRCSR KFQPKPKIQM QNKIHEASTI NADGLESASC 240 LQDSQSIPSE INFGDKCSNP AFSQDDILDL SAVGFTHAIP SESMAELIVD EDPIDLMETS 300 QLNPGFIRDH PEFVPKMPAE LSHARTRKSK ARTPIPSPEQ QNASTSGQEN EAGRSLRPRK 360 NKRNLFQLVD EFDDEFHVDG EFPAECPSSS VAGEDNISDK KFQVENESQR KKVKRNSVKP 420 ISDKEKPAGK QKKPNETLDQ AAKLKPKKFS HSTLKRRRVD KVLLETPEDE IDFQKVPLRD 480 LILLAEHKEQ LQKKEATTGV PSTNQSNGNP SENYNEDEPF ASERDGEYDR EQESQRVEES 540 NIYFNYQTYM DRTPRVRWSK QDTELFYEAI QQFGTDLSMI QQLFPGRTRN QVKLKYKKEE 600 RQHPMRLREA LTNRAKDHSH FEKVIEHLQQ IAAEEKQNSN KDDSIDLTGN EDAEEGSHEA 660 NEEELKVERE GGENEYTAQE FTEIQSPVKS CDSEDDYYLW SQYKSDI*

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MAFELDPLDD IFAEDTAKNA RVGGKFQPKA KQKPSRKGSA ATSVSSLQPV PTTDVIEHES  60
SVILKTNKHS EHYSDVFMPD GNCSWQSNFD KSGENGDILL GLESLDDFLP HATADMETIA  120
DGSTPSEAAS ADVPCTKNAG LPIPVISSIN ASTCPQQSAV QDPLTGGEPI ISISYDGDHM  180
DNRVVETEEM DIMDTQVLSD LATSFGRCSR KFQPKPKIQM QNKIHEASTI NADGLESASC  240
LQDSQSIPSE INFGDKCSNP AFSQDDILDL SAVGFTHAIP SESMAELIVD EDPIDLMETS  300
QLNPGFIRDH PEFVPKMPAE LSHARTRKSK ARTPIPSPEQ QNASTSGQEN EAGRSLRPRK  360
NKRNLFQLVD EFDDEFHVDG EFPAECPSSS VAGEDNISDK KFQVENESQR KKVKRNSVKP  420
ISDKEKPAGK QKKPNETLDQ AAKLKPKKFS HSTLKRRRVD KVLLETPEDE IDFQKVPLRD  480
LILLAEHKEQ LQKKEATTGV PSTNQSNGNP SENYNEDEPF ASERDGEYDR EQESQRVEES  540
NIYFNYQTYM DRTPRVRWSK QDTELFYEAI QQFGTDLSMI QQLFPGRTRN QVKLKYKKEE  600
RQHPMRLREA LTNRAKDHSH FEKVIEHLQQ IAAEEKQNSN KDDSIDLTGN EDAEEGSHEA  660
NEEELKVERE GGENEYTAQE FTEIQSPVKS CDSEDDYYLW SQYKSDI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	455	459	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-49	MYB_related family protein