PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005339.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 463aa MW: 50905.2 Da PI: 9.7143

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005339.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	65	87	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Oeu005339.1 65 FICEICNKGFQREQNLQLHRRGH 87 89*******************88 PP
2	zf-C2H2	12.3	0.00053	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Oeu005339.1 142 WKCQKCSKKYAVQSDWKAHSKTC 164 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MMSDDVFSLP SSAKAFPQQL AEPNPNPKLN ANPTSKKRRN LRGTPDPDAE VIALSPKTLM 60 ATNRFICEIC NKGFQREQNL QLHRRGHNLP WKLKQRANKD QIKKKVYICP EKTCIHHDPS 120 RALGDLTGVK KHFSRKHGEK KWKCQKCSKK YAVQSDWKAH SKTCGTREYK CYCGTLFPRK 180 DSFITHRAFC DALAEESARS VVATNVSSRN DLNGDLMSRQ QNLAHGFSGI PLLGAGFRSD 240 YTGMAPAGNS DQQKPGLSLW LDQVNSQLNP VDPNSNLFMP NMMQMASDNN VSDSSNQFSW 300 LERTAASANY TLFPQEGLKE EAVISKGAES LSSLYSDTKN VHSNSSASTS MSATAILQKA 360 AQMGSTESTP TFFRNPLNKS ELHQVFKQQA PTNTTAINGL DQSIQRSGTA ENQQGSANLH 420 SGFRDFLGMS GEGGAVPFFP PELAKFASMS SAMGLSHFSS NH*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MMSDDVFSLP SSAKAFPQQL AEPNPNPKLN ANPTSKKRRN LRGTPDPDAE VIALSPKTLM  60
ATNRFICEIC NKGFQREQNL QLHRRGHNLP WKLKQRANKD QIKKKVYICP EKTCIHHDPS  120
RALGDLTGVK KHFSRKHGEK KWKCQKCSKK YAVQSDWKAH SKTCGTREYK CYCGTLFPRK  180
DSFITHRAFC DALAEESARS VVATNVSSRN DLNGDLMSRQ QNLAHGFSGI PLLGAGFRSD  240
YTGMAPAGNS DQQKPGLSLW LDQVNSQLNP VDPNSNLFMP NMMQMASDNN VSDSSNQFSW  300
LERTAASANY TLFPQEGLKE EAVISKGAES LSSLYSDTKN VHSNSSASTS MSATAILQKA  360
AQMGSTESTP TFFRNPLNKS ELHQVFKQQA PTNTTAINGL DQSIQRSGTA ENQQGSANLH  420
SGFRDFLGMS GEGGAVPFFP PELAKFASMS SAMGLSHFSS NH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-98	C2H2 family protein