PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005107.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 523aa MW: 58157.2 Da PI: 8.0057

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005107.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	364	386	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++++L H + H Oeu005107.2 364 SCSVCSRVYPTSHLLSIHVSEaH 386 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MSLNLNNDAV QIDYGLGDAA VIDITHSKVS ATARVALQIG GPFMCEGGVC GISNGDGGAL 60 SVVKVMVHYS RRCHRRRRRP QHHNDDLLRT CERRCTVARN VDVAQILQRA DLDLLLRSIG 120 SDFGCGSDFE TCGCNVVCGC GCGRGRGSGG CACGRTSCDV GEVGRWYIVG CVWRCFLTVV 180 VVLVVAMVFS NGFIVGVGIG YWMSETNCLF MIDHLCSDKK ISFEISISTF NFQPEESTMA 240 MEVEEIQTGL GFPHWNPIRR RFFPDAPFFA AGNIERELLA KQLEEGFANW TLLNNWIAAV 300 GRVVRCCNAH STVALDLTEE EKQHIRNMED RESREVFCSI VGCGARLKSL DDFEDHYHAR 360 HTASCSVCSR VYPTSHLLSI HVSEAHDSFF QAKVARGFAM YECLVEGCGV KLKTYKSRQQ 420 HLVDKHKFPS SFEFFKKARP SKKQRQKLQR KQASHKTEEV STAMQVEEET LDGIISAVSK 480 LSTSDSPSSI SFGHRNAHGF AFTPRAVQRE RRSEFSASQT RR*

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MSLNLNNDAV QIDYGLGDAA VIDITHSKVS ATARVALQIG GPFMCEGGVC GISNGDGGAL  60
SVVKVMVHYS RRCHRRRRRP QHHNDDLLRT CERRCTVARN VDVAQILQRA DLDLLLRSIG  120
SDFGCGSDFE TCGCNVVCGC GCGRGRGSGG CACGRTSCDV GEVGRWYIVG CVWRCFLTVV  180
VVLVVAMVFS NGFIVGVGIG YWMSETNCLF MIDHLCSDKK ISFEISISTF NFQPEESTMA  240
MEVEEIQTGL GFPHWNPIRR RFFPDAPFFA AGNIERELLA KQLEEGFANW TLLNNWIAAV  300
GRVVRCCNAH STVALDLTEE EKQHIRNMED RESREVFCSI VGCGARLKSL DDFEDHYHAR  360
HTASCSVCSR VYPTSHLLSI HVSEAHDSFF QAKVARGFAM YECLVEGCGV KLKTYKSRQQ  420
HLVDKHKFPS SFEFFKKARP SKKQRQKLQR KQASHKTEEV STAMQVEEET LDGIISAVSK  480
LSTSDSPSSI SFGHRNAHGF AFTPRAVQRE RRSEFSASQT RR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	7e-88	C2H2 family protein