PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004461.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CAMTA

Protein Properties

Length: 646aa MW: 73051.2 Da PI: 4.7259

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004461.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	169.8	4.3e-53	13	126	4	116
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 e ++rwlk+ e++ iL+n+e+h+lt++ +++p+ gsl L+n+++++yfrkDG+sw+k+kd +t+ E+he+LKvg+ e+++cyYah+e+np+fqrr+yw Oeu004461.1 13 EaQTRWLKPAEVLFILQNYEEHQLTHQIPQKPSGGSLYLFNKRVLKYFRKDGHSWRKRKDQRTIAEAHERLKVGNAEAINCYYAHGEQNPNFQRRSYW 110 5599******************************************************************************************** PP CG-1 101 lLeeelekivlvhyle 116 +L+ ++e+ivlvhy++ Oeu004461.1 111 MLDPAYEHIVLVHYRD 126 ************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MQTEYDINHL AREAQTRWLK PAEVLFILQN YEEHQLTHQI PQKPSGGSLY LFNKRVLKYF 60 RKDGHSWRKR KDQRTIAEAH ERLKVGNAEA INCYYAHGEQ NPNFQRRSYW MLDPAYEHIV 120 LVHYRDIEEG MQNAILASQL SPLASSISSP SPFSFTTQQQ GSSVVINESY EPNQNTSSPG 180 SVEVHSQGVE SRGIYQSDIT GRIDETNNSS DPDLDQALKS IKQQLSLNDD VVEEINMLYN 240 ENKDSNYLGN ALDDYDLSAQ WPEASDGLLL QPCSGDNVEH HQSLAVSGVE VNNWEEIYGS 300 SKNFPDVKSE AYDAHLNENG LNSSSNEPAR NQEIYNWPNF GGQDAQKYPV MIPQEHGSIR 360 YPSYSSMMNT SETNQGYYQT EFGQGQTSSL HENFILMQKF TIREISPQWC YAYEGAKVII 420 IGTFHYKPSE STWACMFGDT EVPVQIIQEG VICCHAPAQL PGKVPLCITS GNRETCSEIW 480 EFEYRVKPSV SAGNNILEKE ARKSPEELLL LVRLVQMLLS DPPDQKEDGS ESRSDLLGKS 540 KTSEDSWSQI IDAILVGTST SLSTMEWLMQ ELLRDKLELW LSSRLQKNNQ LTCSLPKNEQ 600 GVIHIIAGLG YEWALQPILN SGVSVNFRDI NGWTALHWAA RFGSY*

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MQTEYDINHL AREAQTRWLK PAEVLFILQN YEEHQLTHQI PQKPSGGSLY LFNKRVLKYF  60
RKDGHSWRKR KDQRTIAEAH ERLKVGNAEA INCYYAHGEQ NPNFQRRSYW MLDPAYEHIV  120
LVHYRDIEEG MQNAILASQL SPLASSISSP SPFSFTTQQQ GSSVVINESY EPNQNTSSPG  180
SVEVHSQGVE SRGIYQSDIT GRIDETNNSS DPDLDQALKS IKQQLSLNDD VVEEINMLYN  240
ENKDSNYLGN ALDDYDLSAQ WPEASDGLLL QPCSGDNVEH HQSLAVSGVE VNNWEEIYGS  300
SKNFPDVKSE AYDAHLNENG LNSSSNEPAR NQEIYNWPNF GGQDAQKYPV MIPQEHGSIR  360
YPSYSSMMNT SETNQGYYQT EFGQGQTSSL HENFILMQKF TIREISPQWC YAYEGAKVII  420
IGTFHYKPSE STWACMFGDT EVPVQIIQEG VICCHAPAQL PGKVPLCITS GNRETCSEIW  480
EFEYRVKPSV SAGNNILEKE ARKSPEELLL LVRLVQMLLS DPPDQKEDGS ESRSDLLGKS  540
KTSEDSWSQI IDAILVGTST SLSTMEWLMQ ELLRDKLELW LSSRLQKNNQ LTCSLPKNEQ  600
GVIHIIAGLG YEWALQPILN SGVSVNFRDI NGWTALHWAA RFGSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-152	CAMTA family protein