PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004162.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 524aa    MW: 59847.3 Da    PI: 5.0133
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004162.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS44.42.8e-14202269168
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppse 68 
                  l++lL++cA+a+++ +++ +++lL+++ + +sp+g++++Rla++f++A++ar a+++s+ly al++++
  Oeu004162.1 202 LRSLLTRCAQAMADYNTATVNELLKQIWQYSSPYGNATERLAHCFANAIEARAAGTGSTLYTALTSRR 269
                  6899*********************************************************9998775 PP
2GRAS186.81.5e-57272450105282
         GRAS 105 avegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                  a+e+++r+HiiDf+i +G+QWp+L+q  + Rp+g+p lRiTg++ p++g   +e++e+tg+rL +++++++vpf++n+ +ak++++++le+L+++++E
  Oeu004162.1 272 AAEEATRIHIIDFGILYGFQWPCLIQGVSLRPGGSPLLRITGIDFPQPGfrPAERVEKTGHRLMNYCKRFDVPFKYNA-IAKKWDTISLEDLKIERDE 368
                  67899*******************************************9*****************************.7****************** PP

         GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                  +++Vn++++l +++des+ l+s+rd+vL+l+++++P+++v+   +  ++++ F +rf eal++ys+lfd+l+ ++p+e+++r
  Oeu004162.1 369 MVVVNCMYRLRHVPDESAGLDSPRDAVLNLIRKINPDLFVHGVINGTYDASFFTKRFQEALYHYSSLFDMLDGTIPHEDQDR 450
                  ******************************************************************************9998 PP
3GRAS54.32.7e-17443519298374
         GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  + +e ++r+er et++kW+ r ++aGF++++l+++++k++k+ +r+ +++ + ++e+s+++++gWk+r ++++S+W+
  Oeu004162.1 443 IPHEDQDRIERPETYKKWQIRNQRAGFRQLSLNQDIMKEVKAKVRNGYNNDFLLDEDSDWMLQGWKGRVIYALSCWT 519
                  567999******************************************999*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MVLCNPIDAP IPCDFFDGVY EYINQMLMEE DDSVFQDCSA LQATEKYFCE ALCEKDFSSS  60
LDLISSPSDA LSQTIVDHSN DESTNNLVES FLMPDQSRFD LNGSDGRKKN HDRDNGDCEE  120
ERSSKQLASY DEELEQTEKY DKALLCPKMN PGFYNESPAC HCEESSENEG KNKQLYRKPP  180
ESKRGRPRGT KISGTIKEVI DLRSLLTRCA QAMADYNTAT VNELLKQIWQ YSSPYGNATE  240
RLAHCFANAI EARAAGTGST LYTALTSRRI PAAEEATRIH IIDFGILYGF QWPCLIQGVS  300
LRPGGSPLLR ITGIDFPQPG FRPAERVEKT GHRLMNYCKR FDVPFKYNAI AKKWDTISLE  360
DLKIERDEMV VVNCMYRLRH VPDESAGLDS PRDAVLNLIR KINPDLFVHG VINGTYDASF  420
FTKRFQEALY HYSSLFDMLD GTIPHEDQDR IERPETYKKW QIRNQRAGFR QLSLNQDIMK  480
EVKAKVRNGY NNDFLLDEDS DWMLQGWKGR VIYALSCWTP ARE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-142GRAS family protein