PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004160.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 634aa MW: 70832.3 Da PI: 9.0452

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004160.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	534	583	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r ++T E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Oeu004160.1 534 RRPFTVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 583 679*********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MVLLKSLDYG FNGYRVPPTP RAARSARRRC EFRRNDYVQK MCAFDLLATV AGKLLLEGDC 60 SSKSVDTSSD KEQPEVVEDS CERNFLFTEI VSQASNSNFH ANEFGHCQND ACSRPASVIT 120 SESSEKVRSA EPMLNDDCKL RLGIFPHPVD VESSVCRLEG ETKKQIKIES SNNRNLAINN 180 WADTCNDDEK TSGCTRPSTA NKAFRPPPPL LGDCKTRKLL TSKYWKPTPN SKDYDSHAER 240 YNYLNMNKSY KRQRSQRDYP FKKRNFFYCS SVSNSDEGIG SDGICSVPEN GSAGSALGSG 300 PSLPIEMIDI NLVDLTPNAV STPPTSLRGE RASFQSRNSH VKLKIKSFRV PELFIEVPES 360 ATVGSLKRTV MEAMTEILGG GLRVGVLLQG KKIRDDKKTL LQTGISHDNK KLDSLGFTLE 420 PSRTQPPLCL EDHSFERPCD TPQPLARYPP MPNVGQIAHP QGNLDTLSNP TGTKVYNFIE 480 SDRDSAPFPP SMSLEKTTTD SKALVSVPPM KAEELAIVPM RKSKHSESAQ RRIRRPFTVS 540 EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP 600 QELLDRVLTA HAFWSQQQAK QQLKPQPQTC LLL*

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MVLLKSLDYG FNGYRVPPTP RAARSARRRC EFRRNDYVQK MCAFDLLATV AGKLLLEGDC  60
SSKSVDTSSD KEQPEVVEDS CERNFLFTEI VSQASNSNFH ANEFGHCQND ACSRPASVIT  120
SESSEKVRSA EPMLNDDCKL RLGIFPHPVD VESSVCRLEG ETKKQIKIES SNNRNLAINN  180
WADTCNDDEK TSGCTRPSTA NKAFRPPPPL LGDCKTRKLL TSKYWKPTPN SKDYDSHAER  240
YNYLNMNKSY KRQRSQRDYP FKKRNFFYCS SVSNSDEGIG SDGICSVPEN GSAGSALGSG  300
PSLPIEMIDI NLVDLTPNAV STPPTSLRGE RASFQSRNSH VKLKIKSFRV PELFIEVPES  360
ATVGSLKRTV MEAMTEILGG GLRVGVLLQG KKIRDDKKTL LQTGISHDNK KLDSLGFTLE  420
PSRTQPPLCL EDHSFERPCD TPQPLARYPP MPNVGQIAHP QGNLDTLSNP TGTKVYNFIE  480
SDRDSAPFPP SMSLEKTTTD SKALVSVPPM KAEELAIVPM RKSKHSESAQ RRIRRPFTVS  540
EVEALVQAVE KLGTGRWRDV KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP  600
QELLDRVLTA HAFWSQQQAK QQLKPQPQTC LLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-121	MYB_related family protein