PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003627.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 581aa MW: 64705.1 Da PI: 6.8002

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003627.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.8	8.4e-08	343	390	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++ Lq Oeu003627.2 343 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKALMLDEIINYVQLLQ 390 8***********************9....677*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MDRMISESWN LPSQFETTWN GLNVTAEQSF LDANWDKKCT DQFTHFEPVL SSNLGFSNDF 60 ALRELIGKLS IVNSGGLPAT PDGAAAAMAV ATNDDSTKSS CYSTPSNSSP KLHFPILDQI 120 NMRHLGNSLP LTPPLPALSC DPGFAERAAK FSCFGSRSFN GRTSPFGSIN AMENFNLNRV 180 SSSPSLKQAG SPVENKNLNQ SQTEFRSLGG MVDKKWNKLS GAGAYSDEAS SVSEQIPSGE 240 LGSKTPNEHN SRKRKAISKG KAKENTSTSA KGFEDYNNPK TKRSKPQEIS KNENDDVKAE 300 EEAKLNPNGA EDESEKQKEN QKPPEPPKDY IHVRARRGQA TDSHSLAERV RREKISERMK 360 FLQDLVPGCN KVTGKALMLD EIINYVQLLQ HRVEFLSMKL ASVNTRLDFD MENLHSKDIF 420 QEKGNLPQQM YPLHSSASVF YNHQSQQNIQ LNDAHISRGP LNQYSMDPLD AHNPGIQLSS 480 IDGFGESLTQ VIYLSKVLKN LVRNAVEDSH QTYTKRYEEV NFLHNLIFVS TSYFQFPAFS 540 GHDLQSIIQM GFDKDPVKET AFHSDSFHVP NQTSHMKVEL *

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MDRMISESWN LPSQFETTWN GLNVTAEQSF LDANWDKKCT DQFTHFEPVL SSNLGFSNDF  60
ALRELIGKLS IVNSGGLPAT PDGAAAAMAV ATNDDSTKSS CYSTPSNSSP KLHFPILDQI  120
NMRHLGNSLP LTPPLPALSC DPGFAERAAK FSCFGSRSFN GRTSPFGSIN AMENFNLNRV  180
SSSPSLKQAG SPVENKNLNQ SQTEFRSLGG MVDKKWNKLS GAGAYSDEAS SVSEQIPSGE  240
LGSKTPNEHN SRKRKAISKG KAKENTSTSA KGFEDYNNPK TKRSKPQEIS KNENDDVKAE  300
EEAKLNPNGA EDESEKQKEN QKPPEPPKDY IHVRARRGQA TDSHSLAERV RREKISERMK  360
FLQDLVPGCN KVTGKALMLD EIINYVQLLQ HRVEFLSMKL ASVNTRLDFD MENLHSKDIF  420
QEKGNLPQQM YPLHSSASVF YNHQSQQNIQ LNDAHISRGP LNQYSMDPLD AHNPGIQLSS  480
IDGFGESLTQ VIYLSKVLKN LVRNAVEDSH QTYTKRYEEV NFLHNLIFVS TSYFQFPAFS  540
GHDLQSIIQM GFDKDPVKET AFHSDSFHVP NQTSHMKVEL *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	282	RKRKAISKGKAKENTSTSAKGFEDYNNPKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-71	bHLH family protein