PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003421.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 630aa MW: 70118 Da PI: 6.108

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003421.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.5e-10	331	394	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C..................TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.as...............kapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + s ++ a+iL A++Y+k+L Oeu003421.1 331 MAERRRRKKLNDRLYMLRSVVPKiSKdkdlcrvekgflifsEIISMHMDRASILGDAIDYLKEL 394 79*******************666**********8888888*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MLPASNGIVW KGGEEDEEIS WPRNSEIETC KDEDKNASVS SFKSMLENEW FINNAMNKPN 60 PELHMNPSSQ LPEFSSLLFN PLEEESSCSP SQVFTLDPSQ SHLQSLFPPK SCFPSLFNVV 120 WNNPFDNGFD FSGETNFLAN QSATSDSAFM GYNGISSQAE LGILDSSSGF PTTARLHSFS 180 DYNTDIGGRS EAFGIESRSK VLKPLLELPP LGVQPTLFQK RAALRQGVDE LTNLELPRFK 240 SREGSMRVGE SWEKGDDAGE MELELKKKRK RSTDYEMEED DVGALNYYSD EPTDNICNIG 300 DGNENNSNAN SSSTVGDQKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV VPKISKDKDL 360 CRVEKGFLIF SEIISMHMDR ASILGDAIDY LKELLQRIND IHNELEATVP GSVIPPSTNF 420 HPLSPTPATL PYRVKEELCS SSLPIPKNQP VKVEVSLREG RGVNIHMFCA RRMGLLQSTL 480 KTLDDLGLDI QQAVISCFNG FALDVFRAEE RARHFAGADK SSASGVGWVS WCDIMQKLLQ 540 NRHCHHSVPL QPPPSKPTGA RDTTNISSHS NHSSVPDMVW FASKTIRQIS GSAAARANLM 600 HIWLALVGNI EEGKKTCWNV LHSHLFQIF*

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MLPASNGIVW KGGEEDEEIS WPRNSEIETC KDEDKNASVS SFKSMLENEW FINNAMNKPN  60
PELHMNPSSQ LPEFSSLLFN PLEEESSCSP SQVFTLDPSQ SHLQSLFPPK SCFPSLFNVV  120
WNNPFDNGFD FSGETNFLAN QSATSDSAFM GYNGISSQAE LGILDSSSGF PTTARLHSFS  180
DYNTDIGGRS EAFGIESRSK VLKPLLELPP LGVQPTLFQK RAALRQGVDE LTNLELPRFK  240
SREGSMRVGE SWEKGDDAGE MELELKKKRK RSTDYEMEED DVGALNYYSD EPTDNICNIG  300
DGNENNSNAN SSSTVGDQKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV VPKISKDKDL  360
CRVEKGFLIF SEIISMHMDR ASILGDAIDY LKELLQRIND IHNELEATVP GSVIPPSTNF  420
HPLSPTPATL PYRVKEELCS SSLPIPKNQP VKVEVSLREG RGVNIHMFCA RRMGLLQSTL  480
KTLDDLGLDI QQAVISCFNG FALDVFRAEE RARHFAGADK SSASGVGWVS WCDIMQKLLQ  540
NRHCHHSVPL QPPPSKPTGA RDTTNISSHS NHSSVPDMVW FASKTIRQIS GSAAARANLM  600
HIWLALVGNI EEGKKTCWNV LHSHLFQIF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	272	KKRKRS
2	321	339	KKKGLPAKNLMAERRRRKK
3	333	340	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-102	bHLH family protein