PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003329.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 463aa MW: 51023.7 Da PI: 7.7951

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003329.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.9	4.5e-41	174	250	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+akeyhr+hkvC+ hsk+p v+v+gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q+ Oeu003329.2 174 CQVEGCNIDLSTAKEYHRKHKVCDGHSKSPRVIVRGLERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQQ 250 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MEFNSKWDWE TVTAFNSKES ESPRKMLSEV CMTVDDGEID VGSFNLSGDG GNSGTSGSYA 60 GHDSSTKSSI SASTDSSLKD GLKLPSSEFK AFEGSANFIK KMEMARSEVS GISPHLEGSA 120 EPWISLKLRK RTYFENNGAG SNVESVITAV VPTSSTTTMK KSKSSGQNVP IPYCQVEGCN 180 IDLSTAKEYH RKHKVCDGHS KSPRVIVRGL ERRFCQQCSR FHSLSEFDEK KRSCRRRLSD 240 HNARRRKPQQ ETIEFNSSML SSPFSDGRRQ MDFLLNNTPL IHPRTTTNST WDSSCTSKFT 300 VTREFPVKSR RAGGIDVELL MPEIKLPNGI NMQGGTSTGL LASKDSTSEV YNPGFRGHTI 360 FSHMDAAPEY RCALSLLSSN SWESGPESFS PHRPMHENNP GMAQHGNHSI GGGMPLSSSE 420 FWLTGQQSTQ PQSFAMAANS NFQEIQVFKA PYEADFYSNA LN*

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MEFNSKWDWE TVTAFNSKES ESPRKMLSEV CMTVDDGEID VGSFNLSGDG GNSGTSGSYA  60
GHDSSTKSSI SASTDSSLKD GLKLPSSEFK AFEGSANFIK KMEMARSEVS GISPHLEGSA  120
EPWISLKLRK RTYFENNGAG SNVESVITAV VPTSSTTTMK KSKSSGQNVP IPYCQVEGCN  180
IDLSTAKEYH RKHKVCDGHS KSPRVIVRGL ERRFCQQCSR FHSLSEFDEK KRSCRRRLSD  240
HNARRRKPQQ ETIEFNSSML SSPFSDGRRQ MDFLLNNTPL IHPRTTTNST WDSSCTSKFT  300
VTREFPVKSR RAGGIDVELL MPEIKLPNGI NMQGGTSTGL LASKDSTSEV YNPGFRGHTI  360
FSHMDAAPEY RCALSLLSSN SWESGPESFS PHRPMHENNP GMAQHGNHSI GGGMPLSSSE  420
FWLTGQQSTQ PQSFAMAANS NFQEIQVFKA PYEADFYSNA LN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	247	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	3e-57	SBP family protein