PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002954.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 322aa    MW: 35916.9 Da    PI: 5.9374
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002954.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.9e-104998154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r++ +  rE+ RRdr+N+ f+ L   l ++     +K++K++iL+ +++ +k+L
  Oeu002954.1 49 RKVQKADREKLRRDRLNEQFADLGNALDPD----RPKNDKVSILTDTIQMLKDL 98
                 5677889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDQLDSDPLF QPIQAPNNFQ PQPDLHIPSS RSQPDCRFET EVKDSIAARK VQKADREKLR  60
RDRLNEQFAD LGNALDPDRP KNDKVSILTD TIQMLKDLTA QVNKLKAEYS TLTEESRELT  120
QEKNDIREEK ASLKSDIESL NAQYQQRLRS MYPWLGLDRS VVMHPPSYPF PMPMPIPTGT  180
IPMHPSMQPY PYYGNQNPAT FVPYMAHNTM MEQQSTHVSQ VMQPGNRSHT SSKQESRNKS  240
SDGESSIEKS DDSNDIATDL ELKTPGSTSE MDSTSKPRKS RKLPRKENSL ADGGSSSGCL  300
STHSVQATSS NSIAGGAKTD D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.24e-82bHLH family protein