PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002524.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 561aa MW: 62760.6 Da PI: 10.3831

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002524.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.1	2.7e-07	295	335	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 rrRR+ri +++ L++l+P + K++ a++L +A +Y+k L Oeu002524.1 295 ARRRRERIGERIRVLQRLVPGgN------KMDTASMLDEAANYLKFL 335 69****************955......**************98 PP
2	HLH	22.1	2.7e-07	468	508	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 rrRR+ri +++ L++l+P + K++ a++L +A +Y+k L Oeu002524.1 468 ARRRRERIGERIRVLQRLVPGgN------KMDTASMLDEAANYLKFL 508 69****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MESFDWNYSP SVTRTSSIWS NQQYDVVQQL RPVLATGIHF NSNCRNLFHQ EAAKSGPGSS 60 WREIINVDIP CSTTPKNGLI TADVGIGSHS HPKSAINGFQ EVKAGSSTGT VSLDSLDCFL 120 STTNSHTDTS VEDDGISKVF SDCKNSWNDF STVHAVSSGA PVSHVSIGKQ ERNSHSHTNQ 180 FKETFSQTPT DQNVNQPRSS SKKLYTTKRS NAQSELKESP AKPKKSRLDK HPNISHINFQ 240 QHVSSSEPDS AAMAQMKEMM YRAAAFKPVN LTMEAMEKPK RKNIRISTDP QTVAARRRRE 300 RIGERIRVLQ RLVPGGNKMD TASMLDEAAN YLKFLRSQIK ALEELGHTES QDTSQKNTKM 360 INHTSSTIFS LSSSKKLYTT KRSNAQSELK ESPAKSKKSR LDKHPNISHI NFQQHVSSSE 420 PDSAAMAQMK EMMYRAAAFK PVNLTMEAME KPKRKNIRIS TDPQTVAARR RRERIGERIR 480 VLQRLVPGGN KMDTASMLDE AANYLKFLRS QIKALEELGH SMGSVNFHPT NLAYLPFINS 540 FAMQTNFCFQ NPNPNHHSKT *

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MESFDWNYSP SVTRTSSIWS NQQYDVVQQL RPVLATGIHF NSNCRNLFHQ EAAKSGPGSS  60
WREIINVDIP CSTTPKNGLI TADVGIGSHS HPKSAINGFQ EVKAGSSTGT VSLDSLDCFL  120
STTNSHTDTS VEDDGISKVF SDCKNSWNDF STVHAVSSGA PVSHVSIGKQ ERNSHSHTNQ  180
FKETFSQTPT DQNVNQPRSS SKKLYTTKRS NAQSELKESP AKPKKSRLDK HPNISHINFQ  240
QHVSSSEPDS AAMAQMKEMM YRAAAFKPVN LTMEAMEKPK RKNIRISTDP QTVAARRRRE  300
RIGERIRVLQ RLVPGGNKMD TASMLDEAAN YLKFLRSQIK ALEELGHTES QDTSQKNTKM  360
INHTSSTIFS LSSSKKLYTT KRSNAQSELK ESPAKSKKSR LDKHPNISHI NFQQHVSSSE  420
PDSAAMAQMK EMMYRAAAFK PVNLTMEAME KPKRKNIRIS TDPQTVAARR RRERIGERIR  480
VLQRLVPGGN KMDTASMLDE AANYLKFLRS QIKALEELGH SMGSVNFHPT NLAYLPFINS  540
FAMQTNFCFQ NPNPNHHSKT *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	299	KRKNIRISTDPQTVAARRRR
2	453	472	KRKNIRISTDPQTVAARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	1e-45	bHLH family protein