PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002427.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 678aa MW: 75132.4 Da PI: 9.1276

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002427.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.5e-08	579	628	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r ++T E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Oeu002427.1 579 RRPFTVSEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 628 679*********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MALQKKLDYG FSGYEVPPIP RAARSARRRC IFQSKTDDHQ LGAFDLLATV ADKLLMEGGI 60 SPKPVDMYSG KEQQTVVAGS ITEEQAKYKP LIAKSCDLDV CDQSSLFTEQ VSEAPVSNFC 120 SNELTSLQNE PCSLPASVIT SECSRKLADD ECKLGLGIIA QKLDVRSSGC RMSAGCRLDG 180 ESEKQIKMES KVYRNLSISS RDDMCSPGCP ETWESKQSAL VRSPNSIKFP SCRGHMSFGS 240 FPFNSEGVKI VTRDNEEKSR RCTQPTNANT AIRPLSDGGD WRIKKSLASK HCKATSNLKG 300 EGYNANKKRC SFLNTKNRYR RQISQRDYPF KKRKLFYCCS ARNSDVLINS DGICSFSEND 360 SKGAALLPGP ASPGAGECSP FQSRNSHVKL KIKSFRVPDL FIELPETATV GSLKRTVMKA 420 VTSILGDGLH VGMLLQGKKI KDDNRTLLQT GISRDNKSDA LGFTLEPTTQ TFPTHCPEDP 480 FQLPRDSPQP RARSPLIANV VQDAVEQKSL DALTDPAGGN FRNFPESDDD SALSTPDMLL 540 EKTPTGSRAL VAAPKMREAL AIVPMHISKQ SESAQRRMRR PFTVSEVEAL VQAVEKLGTG 600 RWRDVKLRAF DNAKHRTYVD LKDKWKTLVH TARISPEQRR GEPVPQELLD RVLTAHAYWS 660 EQQTKYQLKS QRESCLV*

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MALQKKLDYG FSGYEVPPIP RAARSARRRC IFQSKTDDHQ LGAFDLLATV ADKLLMEGGI  60
SPKPVDMYSG KEQQTVVAGS ITEEQAKYKP LIAKSCDLDV CDQSSLFTEQ VSEAPVSNFC  120
SNELTSLQNE PCSLPASVIT SECSRKLADD ECKLGLGIIA QKLDVRSSGC RMSAGCRLDG  180
ESEKQIKMES KVYRNLSISS RDDMCSPGCP ETWESKQSAL VRSPNSIKFP SCRGHMSFGS  240
FPFNSEGVKI VTRDNEEKSR RCTQPTNANT AIRPLSDGGD WRIKKSLASK HCKATSNLKG  300
EGYNANKKRC SFLNTKNRYR RQISQRDYPF KKRKLFYCCS ARNSDVLINS DGICSFSEND  360
SKGAALLPGP ASPGAGECSP FQSRNSHVKL KIKSFRVPDL FIELPETATV GSLKRTVMKA  420
VTSILGDGLH VGMLLQGKKI KDDNRTLLQT GISRDNKSDA LGFTLEPTTQ TFPTHCPEDP  480
FQLPRDSPQP RARSPLIANV VQDAVEQKSL DALTDPAGGN FRNFPESDDD SALSTPDMLL  540
EKTPTGSRAL VAAPKMREAL AIVPMHISKQ SESAQRRMRR PFTVSEVEAL VQAVEKLGTG  600
RWRDVKLRAF DNAKHRTYVD LKDKWKTLVH TARISPEQRR GEPVPQELLD RVLTAHAYWS  660
EQQTKYQLKS QRESCLV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	334	QRDYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-108	MYB_related family protein