PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002381.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 281aa MW: 32601.1 Da PI: 8.7161

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002381.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	8.9e-06	120	139	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ Oeu002381.1 120 FSCNVCNKTFNRYNNMQMHM 139 89*****************9 PP
2	zf-C2H2	12.1	0.00059	204	226	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C ksF k + ++H +++ Oeu002381.1 204 FMCRKCAKSFAVKGDWRTHEKNC 226 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MSFLKYPTYY QQQPPKEEYN IYETIKCLPL LSRFKEEKKL ENEEEDDDDG AKKEEKMEKV 60 TVALHIGLPN VGAFDPETKP YKFKEEYEKK TPNVCSFNSS DQRRFWIPTP AQILVGPMQF 120 SCNVCNKTFN RYNNMQMHMW GHGSEYRKGP ESLRGTQPAA MLRLPCYCCS QGCKNNINHP 180 RAKPLKDFRT LQSHYKRKHG TKPFMCRKCA KSFAVKGDWR THEKNCGKLW YCTCGSDFKH 240 KRSLKDHIRS FGKGHSPYPS LEGFEDEKEC VTGGSEDENA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-110	C2H2 family protein