PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002322.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family RAV
Protein Properties Length: 352aa    MW: 39294.6 Da    PI: 6.2914
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002322.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.13.3e-114290155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 s+ykGV     +g W A+I+       + +r++lg+f +++eAa a++ a+ kl++
  Oeu002322.1 42 SKYKGVVIQQ-NGHWGAQIYA------NhQRIWLGTFRSEKEAAMAYDSAAIKLRN 90
                 89****8666.9******999......44**********99*************97 PP
2B384.78.4e-27160254185
                  EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                  f+k+ltpsdv+k++rlv+pkk+a ++           gg+ +e+++l++ d+s r W+++++y+k+s+++v+t+GW++F+k++gL+ +D ++F+  
  Oeu002322.1 160 FQKELTPSDVSKLNRLVIPKKYAVKYfprisdlednnGGN-TEEVELVFFDPSMRPWKFRYCYWKSSQSFVFTRGWNRFAKEKGLRPRDRIIFSAY 254
                  99*********************************96555.5789************************************************943 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEEQSVISGG ASTGAGEVSD SNNSISHLHN KYPKHDYAAA CSKYKGVVIQ QNGHWGAQIY  60
ANHQRIWLGT FRSEKEAAMA YDSAAIKLRN GDTQRNFPLS DVTIHEPNFQ GQFSTEVVLN  120
MIKDGTYASK FSDYLSARAQ VGHSLATSPN TTGFLGGQLF QKELTPSDVS KLNRLVIPKK  180
YAVKYFPRIS DLEDNNGGNT EEVELVFFDP SMRPWKFRYC YWKSSQSFVF TRGWNRFAKE  240
KGLRPRDRII FSAYGCRDGS NEVRKLCMID VAYYDGAHVH GIQASNNGED ALNLQIAQPA  300
EDLDHGEEAE EMNIQHNGED ENASGGERDF LGTFPTNTEK IGFRLFGVQI T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.19e-96RAV family protein