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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu001897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25193.2 Da PI: 5.591 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.7 | 4.3e-16 | 74 | 122 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++g+Wv+eIr+p++ ++r++lg++ ++e+Aa+a++ a+++l+g Oeu001897.1 74 LYRGIR--SRSGKWVSEIREPKK---TTRIWLGTYPSPEMAAAAYDVAALALKG 122 69***6..678*********854...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MAEPPHDPKI SQQDHPPPPV QTSPPPPHPP IQPPPPHTIL HQADEKLESP RKVQRTSTSS 60 GSPSSRPTSG KHPLYRGIRS RSGKWVSEIR EPKKTTRIWL GTYPSPEMAA AAYDVAALAL 120 KGSDHALLNF PDRVSTYPVP GSPSPAEIRR AAAAAAALMK PVSNTEDVVV EPPGDGGSAN 180 AQVEREFIDE EALFDMPNLL VDMAEGMLVS PPRMTSPPSD GSPENSDSES LWSY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-47 | ERF family protein |