PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001894.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 372aa MW: 42490.4 Da PI: 4.4396

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001894.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.2	1.7e-16	140	224	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ L++a ++ + +r++l+ W++vskk+ +e +fer+ +qC+++++ l+k+ykk+k ++ +++s+s+++yf++++ Oeu001894.1 140 WTESETVILLDAWGDRFLKHGRKSLRSEEWQQVSKKVsQESKFERTDTQCRNRLDTLKKKYKKEKMKLRE-SEGSTSKWVYFEKMD 224 ***********************************8899************************9.599999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDDTQEDARY PPNPYGISNQ EFPVHNANYT RSIGNEYVED NDNDVNDEDL EYEDDDEDDG 60 GGSSVQRIGK DDYVDEDEDE DEDEDEDDDD YGNLQRHPKK RKLKSLLSSY EFAPRVPPPS 120 SATPAVPKPS YGGRNPHTDW TESETVILLD AWGDRFLKHG RKSLRSEEWQ QVSKKVSQES 180 KFERTDTQCR NRLDTLKKKY KKEKMKLRES EGSTSKWVYF EKMDMLLSSG PQQAGLSCGV 240 DSGENMFMNP KVYLKSSNGM DEMRDSPGNS ESSKGEEGES EGLPPKKTRN EMGNGASLKL 300 LADCIQKFSN IYEKTENSKR QQMLELEKMR MDFHRDLELQ KRQILERAQA EIVKIRQGNE 360 DNDVSAENVS G*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDDTQEDARY PPNPYGISNQ EFPVHNANYT RSIGNEYVED NDNDVNDEDL EYEDDDEDDG  60
GGSSVQRIGK DDYVDEDEDE DEDEDEDDDD YGNLQRHPKK RKLKSLLSSY EFAPRVPPPS  120
SATPAVPKPS YGGRNPHTDW TESETVILLD AWGDRFLKHG RKSLRSEEWQ QVSKKVSQES  180
KFERTDTQCR NRLDTLKKKY KKEKMKLRES EGSTSKWVYF EKMDMLLSSG PQQAGLSCGV  240
DSGENMFMNP KVYLKSSNGM DEMRDSPGNS ESSKGEEGES EGLPPKKTRN EMGNGASLKL  300
LADCIQKFSN IYEKTENSKR QQMLELEKMR MDFHRDLELQ KRQILERAQA EIVKIRQGNE  360
DNDVSAENVS G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-66	Trihelix family protein