PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001890.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 345aa    MW: 37540.5 Da    PI: 6.4396
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001890.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.94.9e-17237271135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu001890.1 237 CLHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 271
                  99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEYFMGDYAE FSSVDNINGN SNGNGAHFTV DDLLDFSKED VAMTDAFFDS LAANSGDSSA  60
VTVVDSCNSS VSGGGDGQFN GKVSCRSFTD SQFSGNELCV PYDDLAELEW LSNFVEESFS  120
SDDVHKLHFI PTHTATAVEP TVTSSSATTI SVSPINHSPP PPIFPSDVSV PGKARSKRSR  180
AAPCDWSSRL LLLSAPPSST SYTHYNNITA NTDPNPKAMK TTPTKRREPT ETPGRKCLHC  240
ASEKTPQWRT GPLGPKTLCN ACGVRYKSGR LVPEYRPAAS PTFVSTKHSN SHRKVVELRR  300
QKELQMHQQQ LLSQTSIFNI SNGCDDFLIH HHNGANDPDF KNVI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-68GATA family protein