PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001576.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 328aa MW: 35137.4 Da PI: 8.8889

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001576.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.7	2.5e-39	50	151	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ Oeu001576.1 50 PPKRTTTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGLKSDGETVEWLLQQAEPAVIAATGTGTIPANFTsLNISVRSSGSTMSAPlrnsffnqny 147 789******************************************************************99976666666666444445445554443 PP TCP 89 ...k 89 + Oeu001576.1 148 aasS 151 3330 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MDGDIGNGNS KRRPNFPLQL LGKREEEEEE AGCSSSKRTV SGSEPPKKPP PKRTTTKDRH 60 TKVEGRGRRI RMPATCAARV FQLTRELGLK SDGETVEWLL QQAEPAVIAA TGTGTIPANF 120 TSLNISVRSS GSTMSAPLRN SFFNQNYAAS SQLRCIEESQ RRFLFPEIGL SSQNETMAKG 180 ETSMGRRRQP EEELPPLLQT QMGSHNYMLQ SSTSSIPASQ GQNIPATAFL MVTNTNSQVM 240 SSTSGSSFWP LGSAMSGGGL NFMNFPPPMS FLPGQQLGGA GGGAVVDGHM GMLAALNAFR 300 PISGSTAPLD AHSSDPDHQH VTTSHHF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	7e-41	TCP family protein