PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001489.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 470aa    MW: 53003.9 Da    PI: 5.796
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001489.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.84.5e-138464661374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA++v++g+le+a+ +L ++s+laspdgd+mqR+a+yf eALa r++r+++++yka++ ++ +    +e++ ++k+fs+  P++k++++++
  Oeu001489.1  46 LIHLLVTCANHVATGSLENANIALDEISHLASPDGDTMQRIASYFSEALADRILRTWPGVYKAFRLTQIT--IYAEQVLVRKMFSKFLPFMKVAFVIT 141
                  689*************************************************************999998..5889999******************* PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  NqaI+ea+ege++vH+iD+++ +++QW aL+q L++Rpegpp+lRiTg+++    +ke le++++ L + Ae+l++pf+fn+ ++++le+l++e+ +v
  Oeu001489.1 142 NQAIVEAMEGEKMVHVIDLNAAEPAQWCALIQDLSARPEGPPHLRITGIHQ----QKEVLEQMAHVLIEEAEKLDIPFQFNP-LVSKLENLDFEKVHV 234
                  ***************************************************....9**************************.5999*********** PP

         GRAS 197 kpgEalaVnlvlqlhrll.........................................................desvsleserdevLklvkslsPk 237
                  k+gEalaV++++qlh ll                                                          ++ s+  + d++L ++++lsPk
  Oeu001489.1 235 KTGEALAVSSIMQLHLLLasdselrknslpmpmnasgvhlqmvnqmnqsslrellekdmvnsrspsndsasssplYSTPSS--NMDSFLTALWGLSPK 330
                  *******************************************************************99887664333333..469************ PP

         GRAS 238 vvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaak 335
                  ++vv+eq++dhn++s++er++e+l++ysalfdsle++lpr+s eri +E++ lg+ei+n+vace aer+erhe+l+kW +r++ aGF +vpl+++a+ 
  Oeu001489.1 331 IMVVTEQDSDHNGTSLMERISESLYFYSALFDSLESTLPRTSLERIRIEKM-LGEEIKNIVACERAERKERHEKLGKWAQRFDFAGFANVPLGYYAML 427
                  ***************************************************.********************************************** PP

         GRAS 336 qaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  qa+ ll+ ++ dgy+++ee+g++v++W+drpL++vS Wr
  Oeu001489.1 428 QANKLLQGYNCDGYKIKEENGCVVICWQDRPLFAVSTWR 466
                  **************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MFQEDGSSSV ISSSLQMFPM LSVSPGTMSP YPWLKELKPE ERGLYLIHLL VTCANHVATG  60
SLENANIALD EISHLASPDG DTMQRIASYF SEALADRILR TWPGVYKAFR LTQITIYAEQ  120
VLVRKMFSKF LPFMKVAFVI TNQAIVEAME GEKMVHVIDL NAAEPAQWCA LIQDLSARPE  180
GPPHLRITGI HQQKEVLEQM AHVLIEEAEK LDIPFQFNPL VSKLENLDFE KVHVKTGEAL  240
AVSSIMQLHL LLASDSELRK NSLPMPMNAS GVHLQMVNQM NQSSLRELLE KDMVNSRSPS  300
NDSASSSPLY STPSSNMDSF LTALWGLSPK IMVVTEQDSD HNGTSLMERI SESLYFYSAL  360
FDSLESTLPR TSLERIRIEK MLGEEIKNIV ACERAERKER HEKLGKWAQR FDFAGFANVP  420
LGYYAMLQAN KLLQGYNCDG YKIKEENGCV VICWQDRPLF AVSTWRFRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein