PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001347.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 485aa MW: 53428.2 Da PI: 8.8156

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001347.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Oeu001347.1 63 FICEICNKGFQREQNLQLHRRGH 85 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MMSGEVFSVS SVKAFLQEPE QNPNPKTDTN PNVKKRRNLP GTPDPDAEVM ALSPMTLMAT 60 NRFICEICNK GFQREQNLQL HRRGHNLPWK LKQRSNKDQV KKKVYICPEK TCVHHDPARA 120 LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VHSDWKAHSK TCGSREYKCD CGTLFSRKDS 180 FITHRAFCDA LAEDTARMNS IGASNLKFRN DLNGNLMNPP PNLTHGLSTG KPRLSLWLDL 240 ANSQLNPIDI SSVNSNLIMP SNSSGLPDMM QMTSNNVFGQ SLVGNYANLS LSALPPTQGL 300 KEEAASRGST LMADSPTSLY SENQNQQAKS FAPMSATALL QKAAQMGCTK SNPTFHENTL 360 GVMNSFPSSY SDSVQNRSEM NQGLGKQQEN SAAKPTDPVM GASNFTSSTS TTMDRLDQSF 420 HQTDGTQSQT ASPNLNSRLH GLYHCLTRDF LGMGGEGGGP FLQELENFAF MNSAIELNHF 480 TCNQ*

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MMSGEVFSVS SVKAFLQEPE QNPNPKTDTN PNVKKRRNLP GTPDPDAEVM ALSPMTLMAT  60
NRFICEICNK GFQREQNLQL HRRGHNLPWK LKQRSNKDQV KKKVYICPEK TCVHHDPARA  120
LGDLTGIKKH FSRKHGEKKW KCEKCSKKYA VHSDWKAHSK TCGSREYKCD CGTLFSRKDS  180
FITHRAFCDA LAEDTARMNS IGASNLKFRN DLNGNLMNPP PNLTHGLSTG KPRLSLWLDL  240
ANSQLNPIDI SSVNSNLIMP SNSSGLPDMM QMTSNNVFGQ SLVGNYANLS LSALPPTQGL  300
KEEAASRGST LMADSPTSLY SENQNQQAKS FAPMSATALL QKAAQMGCTK SNPTFHENTL  360
GVMNSFPSSY SDSVQNRSEM NQGLGKQQEN SAAKPTDPVM GASNFTSSTS TTMDRLDQSF  420
HQTDGTQSQT ASPNLNSRLH GLYHCLTRDF LGMGGEGGGP FLQELENFAF MNSAIELNHF  480
TCNQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-100	C2H2 family protein