PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001280.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 437aa    MW: 48328.7 Da    PI: 8.5312
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001280.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.71.9e-19341374134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C++C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  Oeu001280.1 341 CTHCEVTKTPQWREGPLGPKTLCNACGVRYRSGR 374
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MNMVEPNSCW DGIVNETMPD EEFESIFSLL DFPMESLEGD ELIGDWDVSK SQCLGPIPTD  60
TLMKLPPNPR GKIGTVLPQS LPKSVAPVSL TCQVLHLLGM TNPCFEWGNL SMLLPVDAFS  120
CKLSSTKSRM KFVAVVVTHG QLLPSKTGYM QPLSSEGVPM DDSGISFLEA CFEIILLNID  180
EIHEQKQLLE ETPSSVILRQ HKFTEGQEYG VFQTQSPVSV LESCRYCSVG KCAPIKSKRV  240
KFLPWLSAGI VIPVQGRSKR VRSSTVNPWL LISPISSASS TSKKTSNFRK NKDKRKKLSQ  300
LSVSNETMDY PSQKVKASSM VSNSVEPQNT SLQRVTASKK CTHCEVTKTP QWREGPLGPK  360
TLCNACGVRY RSGRLFPEYR PAASPTFVPS QHSNSHKKVT EMRNKGKQHA DKVEEPLISP  420
LSGFAPMGSY LFDFIC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-38GATA family protein