PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000906.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 336aa    MW: 36462.6 Da    PI: 8.2083
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000906.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.27.8e-10248291755
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ ++RR+ri +++  L++l+P+       K++ +++LekA+ Y+k Lq
  Oeu000906.1 248 IAAKNRRERISERLKILQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 291
                  5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MALAKDPMPH DSTLGSVQAT AYYGNNFGGS SFHSSINPSA ELNGMDEPQK MAFQEGEKVA  60
VFAKNFTMSN SSSVSSPSSS NSNGLGYLVA PYLSEEGHTI ISFKPEYGNF MQTGVSLLIF  120
EQSKGLKMSN QQDDYSVWED NLHGNYQYQL NPKCSTPTHS LIETSNSLNA IGYGSPGSGG  180
QFRWLNTEAN THTNGIQESA RQETGSNKRP IMGENSQAHK KQCTVASSVG SKNKHKPKST  240
PAKDPQSIAA KNRRERISER LKILQDLVPN GSKVDLVTML EKAISYVKFL QLQVKVLATD  300
EFWPAQGGKA PELSQVKEAI DAILASQVDR NSSSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.15e-60bHLH family protein