PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000886.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 331aa MW: 37362.3 Da PI: 4.6386

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000886.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	5.9e-19	62	115	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k Oeu000886.1 62 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 115 566899***********************************************9 PP
2	HD-ZIP_I/II	126.7	1e-40	61	151	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk+++d+lk++ e+L+ ++e+L +e+ Oeu000886.1 61 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANFDTLKHNYETLQLDNENLLKEI 151 69*************************************************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MKRLGSSDSL GALNPLMSIC PNTTEEHNQG NNQAYTREFQ ALLEGLDEDG CVEESGGHMA 60 EKKRRLSVDQ VKALEKNFEV ENKLEPERKV KLAQELGLQP RQVAVWFQNR RARWKTKQLE 120 RDYGVLKANF DTLKHNYETL QLDNENLLKE IWELKSKLNE DGISESKVIV KEEKIVSETD 180 EKSKAETTWN SLTKCDQDST DLHLENLNGT NGVISAPVFT DFKDGSSDST DSSAILNEDN 240 NSPTAAISSS AGRVSPPQFL DLQNGSSSSM ACTFQFSEPK TNIIRDAHKA YQPQFVKIEE 300 HNFFGEESCS TFFSDDQAPT LHWYFPEDWH *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	91	KKRRLSVDQVKALEKNFEVENKLEPERKVK
2	110	118	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G40060.1	6e-77	HD-ZIP family protein