PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000601.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 252aa    MW: 27359.1 Da    PI: 7.8705
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000601.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.0003897119123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C+ C++sF++   L  H  +H
  Oeu000601.1  97 YECKTCNRSFPSFQALGGHRASH 119
                  99**********99999998887 PP
2zf-C2H214.40.00011161183123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++Cg  Fs+   L  H+r+H
  Oeu000601.1 161 HECSICGSKFSSGQALGGHMRRH 183
                  78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEECLGSNDH SIVKGKRTKR QRPSSSTLSS SGATALIGGD GGGGEFYSSF SSLTTSISTN  60
TEEDEDMANC LIFLAQGGVS LPKNATSMTT KDSIYIYECK TCNRSFPSFQ ALGGHRASHK  120
KSKPSENDQK ETPVHIRSGN QEEEEKSHKS FHYTHNNPKI HECSICGSKF SSGQALGGHM  180
RRHRNPNSTR VNESSSNDGE KPRNILALDL NLPAPAEDNH RPVSGPRPNF QFSSNHQGLT  240
FSAVALVDCH Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.13e-49C2H2 family protein