PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000316.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 318aa    MW: 37724.5 Da    PI: 10.1218
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000316.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1087.2e-34141062103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Flkk++++++d +++++isws++ nsf+v+d+++f+ ++Lpk+Fkh+nf+SFvRQLn+YgF+k++ ++         weF ++ F++gk +ll+++k
   Oeu000316.1  14 FLKKTFQMVDDLNTDSVISWSSTRNSFIVWDPHKFSMDLLPKHFKHNNFSSFVRQLNTYGFRKIDADR---------WEFVNEGFQQGKIHLLKNVK 101
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   rk+++
   Oeu000316.1 102 RKNQR 106
                   **985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MPIERLKEMV PPPFLKKTFQ MVDDLNTDSV ISWSSTRNSF IVWDPHKFSM DLLPKHFKHN  60
NFSSFVRQLN TYGFRKIDAD RWEFVNEGFQ QGKIHLLKNV KRKNQRTQII HQKVASQSWL  120
DSSEYGLENE LEKLRKDQDI LKMEILKLKK QQENKENYRS SIKDRLQNAE TKQRNTVVYL  180
VKVLKDPLFL QFIKKMRQKN VLNSVGMLKK RRLMKNIDKS VQEELTPIQS EIQALFSTDN  240
SGWNKRFELL NSENFILWEK LKEDVMIYEA EAEKAKQQSD IVLEFEDFIA KLPERDIPMR  300
NHVEPVQCRV SKVSFQG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194200KKMRQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.13e-72HSF family protein