PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000289.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1010aa MW: 111574 Da PI: 6.51

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000289.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.5	2.5e-23	131	231	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ +sW++++iyr++++r++lt+GW+ Fv++++L +gD+v+F ++++ +l Oeu000289.1 131 FCKTLTASDTSTHGGFSVPRRAAEKIfpsldfSMQPPA-QELVAKDLHDQSWTFRHIYRGQPKRHLLTTGWSVFVSSKRLTAGDSVLFI--RDEKSHL 225 99***************************9445444.38**********************************************..4567777 PP EEEEE- CS B3 93 vvkvfr 98 +++++ Oeu000289.1 226 LLGIRH 231 888875 PP
2	Auxin_resp	118.4	6e-39	257	339	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa ++s+F+++YnPras+seFv++++k++k ++++vs+GmRf+m+fete+s rr++Gt++g+ dldpvrW+nS+Wr+L+ Oeu000289.1 257 AAHAAGNNSPFKIFYNPRASPSEFVIPLAKYNKGMYTQVSLGMRFRMMFETEESGVRRYMGTITGIGDLDPVRWTNSQWRNLQ 339 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1010 aa Download sequence
MSFAKMKVPS NGYMANTGEG GENVINSELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA 60 SMHKEAESIP SYPNLPSKLI CMLHNVTLHA DAETDEVYAQ MTLQPVSNAS QEALLLSEMG 120 LKQSRQPSEF FCKTLTASDT STHGGFSVPR RAAEKIFPSL DFSMQPPAQE LVAKDLHDQS 180 WTFRHIYRGQ PKRHLLTTGW SVFVSSKRLT AGDSVLFIRD EKSHLLLGIR HATRQQPAIS 240 SSVISSDSMH MGVLAAAAHA AGNNSPFKIF YNPRASPSEF VIPLAKYNKG MYTQVSLGMR 300 FRMMFETEES GVRRYMGTIT GIGDLDPVRW TNSQWRNLQV GWDESTAGER PSRVSIWEIE 360 PIVTPFYICP PPFFRPKFSK QPGFPDDDSD IENIFKRGMP LIGEDYGLKD TSSFIFPGMS 420 LVQWMNMQQN QQFTANQSGL FPDGLSSTNL HGNLGTDDCS KLLNFQSPAF ASQNLQLSKI 480 NQQVGQLQQQ PSSAWPQQQP LQQMLTSSIN PINNGVAPDQ NPYQNSQQTA IISQQLQQQQ 540 LLRGNTQMQQ NVPSANKSTV PMISLPQDTQ FQQHIEQPSS LVQRPQQQQT EMQQTRPQFP 600 QPISIQKPQG KQTSQQSISE HQLQMQILQK HQQQQQLQQV PSPVTSTLVQ SPQFPVNQLY 660 SQQKSTFTVK SHSEPADAAG PSCSTAPCTN NMQASLSNFL NRNQLGSAAL LDNSVIHPVP 720 SLAPESHSKA DILIKSDLPS YKGPKQPKYR NTAKDHLDAA SSATSYCLDA SGRQNFSLAG 780 LDGDIQSHPQ SSLPFTSSID GLTPDALLSR GCDSGKDIQN LLSNYSGNPR DNETEFCSAG 840 INSQTFGLPK MSFNASCSND AGINEAGVLN SGLWPNQIQR MRTYTKVQKR GSVGRTIDVT 900 RYKGYDELRH DLARMFGING LLEDPQRSEW KLVYVDHEND MLLVGDDAWD EFVSCVQSIK 960 ILSSAEVQQM SLDGDLAQPP APNQAFSGTD SGNAWRGQYD DNSANSFNR*

Sequence ? help Back to Top

Protein Sequence Length: 1010 aa Download sequence

MSFAKMKVPS NGYMANTGEG GENVINSELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA  60
SMHKEAESIP SYPNLPSKLI CMLHNVTLHA DAETDEVYAQ MTLQPVSNAS QEALLLSEMG  120
LKQSRQPSEF FCKTLTASDT STHGGFSVPR RAAEKIFPSL DFSMQPPAQE LVAKDLHDQS  180
WTFRHIYRGQ PKRHLLTTGW SVFVSSKRLT AGDSVLFIRD EKSHLLLGIR HATRQQPAIS  240
SSVISSDSMH MGVLAAAAHA AGNNSPFKIF YNPRASPSEF VIPLAKYNKG MYTQVSLGMR  300
FRMMFETEES GVRRYMGTIT GIGDLDPVRW TNSQWRNLQV GWDESTAGER PSRVSIWEIE  360
PIVTPFYICP PPFFRPKFSK QPGFPDDDSD IENIFKRGMP LIGEDYGLKD TSSFIFPGMS  420
LVQWMNMQQN QQFTANQSGL FPDGLSSTNL HGNLGTDDCS KLLNFQSPAF ASQNLQLSKI  480
NQQVGQLQQQ PSSAWPQQQP LQQMLTSSIN PINNGVAPDQ NPYQNSQQTA IISQQLQQQQ  540
LLRGNTQMQQ NVPSANKSTV PMISLPQDTQ FQQHIEQPSS LVQRPQQQQT EMQQTRPQFP  600
QPISIQKPQG KQTSQQSISE HQLQMQILQK HQQQQQLQQV PSPVTSTLVQ SPQFPVNQLY  660
SQQKSTFTVK SHSEPADAAG PSCSTAPCTN NMQASLSNFL NRNQLGSAAL LDNSVIHPVP  720
SLAPESHSKA DILIKSDLPS YKGPKQPKYR NTAKDHLDAA SSATSYCLDA SGRQNFSLAG  780
LDGDIQSHPQ SSLPFTSSID GLTPDALLSR GCDSGKDIQN LLSNYSGNPR DNETEFCSAG  840
INSQTFGLPK MSFNASCSND AGINEAGVLN SGLWPNQIQR MRTYTKVQKR GSVGRTIDVT  900
RYKGYDELRH DLARMFGING LLEDPQRSEW KLVYVDHEND MLLVGDDAWD EFVSCVQSIK  960
ILSSAEVQQM SLDGDLAQPP APNQAFSGTD SGNAWRGQYD DNSANSFNR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein