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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu000048.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 257aa MW: 27621.6 Da PI: 8.7241 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 90 | 140 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+Wv+eIr+p++ + r++lg++ ae+Aa+a++ a+++++g+ Oeu000048.1 90 TYRGVRKRS-WGKWVSEIREPKK---KSRIWLGTYPRAEMAARAHDVAALAIKGH 140 69****888.**********854...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MERKIILASL ALDYLSSSST STITFTCSSS SSAATSAASC GGLSSSPSNK SSSSTSNSSC 60 KGKKSKITVQ GDQRSGSEDI KRRRDQNHPT YRGVRKRSWG KWVSEIREPK KKSRIWLGTY 120 PRAEMAARAH DVAALAIKGH SAYLNFPHLA HKLPQPVSTS PKDIQAAAAK AAAATPISHH 180 NHGTATEVEA KLTSSRSSTN LALENVQESS NCSVSTGDDD PFFDLPDLSP EASSWRLDGD 240 DIGFQLEDPF LWECYI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 7e-45 | ERF family protein |