PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000035.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 439aa MW: 47100.1 Da PI: 6.6948

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000035.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.9	2.4e-15	257	302	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq Oeu000035.2 257 HNLSERKRRDKINQKMKTLQKLVPNS-----NKTDKASMLDEVIEYLKQLQ 302 9**********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MNQCVPSWDL DGNPTNPRLD YEVAELTWEN GQLAMHGLGP PRAPNKPVAA SAGSNKYTWD 60 KLHAGGTLES IVDQATRQPS EGKAAVNGGG DELVPWFDHH RNMVNPDATA TMTMDALVPC 120 TNISSQEPSA QVLDSVSGIG SCVMGCSTHV GSCSGANAAM LARVGRESAL DWSSKADQSL 180 SGRDSHQLTF DTCDLELGSP ENTSSARDWA KTGEDDDSVC HCGSERETGN GEDKIHKKKG 240 KGKSSTSTKR SRAAAIHNLS ERKRRDKINQ KMKTLQKLVP NSNKTDKASM LDEVIEYLKQ 300 LQAQVQMINR MNNMSSLLMP LAMQQQLQMS SMMGPMAGIG MAAMAGIGMG VMDLNTISRA 360 GIPPFLHPGA APPFMPHTAS WDINPGDRLS IPASVIPTDS LYAHLACQSQ QPMTMEAYSR 420 MAASYQQFQH PPASGSKT*

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MNQCVPSWDL DGNPTNPRLD YEVAELTWEN GQLAMHGLGP PRAPNKPVAA SAGSNKYTWD  60
KLHAGGTLES IVDQATRQPS EGKAAVNGGG DELVPWFDHH RNMVNPDATA TMTMDALVPC  120
TNISSQEPSA QVLDSVSGIG SCVMGCSTHV GSCSGANAAM LARVGRESAL DWSSKADQSL  180
SGRDSHQLTF DTCDLELGSP ENTSSARDWA KTGEDDDSVC HCGSERETGN GEDKIHKKKG  240
KGKSSTSTKR SRAAAIHNLS ERKRRDKINQ KMKTLQKLVP NSNKTDKASM LDEVIEYLKQ  300
LQAQVQMINR MNNMSSLLMP LAMQQQLQMS SMMGPMAGIG MAAMAGIGMG VMDLNTISRA  360
GIPPFLHPGA APPFMPHTAS WDINPGDRLS IPASVIPTDS LYAHLACQSQ QPMTMEAYSR  420
MAASYQQFQH PPASGSKT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	266	ERKRRD
2	262	267	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-82	bHLH family protein