PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91558.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 411aa    MW: 46302.8 Da    PI: 5.0564
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS299.11.1e-91304103374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ecA+a+s++d  ++++lL+ l+elasp+gd  q+la+yf++AL  + ++++ ++yk+l + ++++++ + + +    f+evsP+ +f+h++ N a
  OWM91558.1  30 NLLRECARAISDKDSGKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATDTGRRCYKTLISVAEKSHSFDAARKLILKFQEVSPWTTFGHVASNGA 128
                 7899**********************************************************8888874444444444444****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199
                 Ilea+ege+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T ++  +s+ +  ++e+g+r++kfA+ +gvpfe+nv+   ++l++l+ eeL ++++
  OWM91558.1 129 ILEALEGESKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTIIVT-ASVVRLVMKEIGQRMEKFARLMGVPFEINVIsEPTNLAELTKEELGIQED 226
                 ************************************************.66899*************************844449************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 Ea+aVn++ +l r+      +e+ r++v+++++sl+Pkvv+vve+ead +s+  +F++ f e+l++y+  f++le+++ ++s+er ++Er   +r+iv 
  OWM91558.1 227 EAVAVNCIGALRRVE-----VED-RTAVIRMFQSLRPKVVTVVEEEADFSSPreDFVKCFEECLRFYTLYFEMLEESFIPTSNERLMLERD-CSRSIVR 318
                 *************97.....555.889********************99654339************************************.89***** PP

        GRAS 297 vvacegaerr..........erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve......eesgslvlgWkdrpLvsvSaWr 374
                 v+ac + +            er+e+  +W+++l++a F pv++s+++ +++k+ll++++  g+++       +++  ++l Wkd+p+v++SaW+
  OWM91558.1 319 VLACDTCSDDgdgnitggecERRERGIQWSNKLKQA-FFPVRFSDDVIDDVKALLKRYQ-AGWSLVppqgqvDQELGIYLAWKDEPVVWASAWK 410
                 ****85432111222222229**************9.88********************.8888876666544455667**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MHSANNSHPS PATHSSDSAE LSAAGKWAAN LLRECARAIS DKDSGKIHHL LWMLNELASP  60
YGDCDQKLAS YFLQALFCKA TDTGRRCYKT LISVAEKSHS FDAARKLILK FQEVSPWTTF  120
GHVASNGAIL EALEGESKLH IIDISNTLCT QWPTLLEALA TRNDETPRLK LTIIVTASVV  180
RLVMKEIGQR MEKFARLMGV PFEINVISEP TNLAELTKEE LGIQEDEAVA VNCIGALRRV  240
EVEDRTAVIR MFQSLRPKVV TVVEEEADFS SPREDFVKCF EECLRFYTLY FEMLEESFIP  300
TSNERLMLER DCSRSIVRVL ACDTCSDDGD GNITGGECER RERGIQWSNK LKQAFFPVRF  360
SDDVIDDVKA LLKRYQAGWS LVPPQGQVDQ ELGIYLAWKD EPVVWASAWK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-146GRAS family protein