PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91360.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GeBP
Protein Properties Length: 333aa    MW: 38675.8 Da    PI: 4.9067
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.64.7e-25130222398
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 fqr wse+De+ +++Gl++f ++++ +p+ d ++fye +k++i++ v+k ql +Kir+LKkKf+ ++k+ak+g +    ++ + + +el++k Wgs
  OWM91360.1 130 FQRKWSESDEMEVMKGLVEFSERKKDNPVYDYNDFYELIKRKIQSFVTKPQLRSKIRNLKKKFRSCEKRAKKGAK---LSPLEVNFLELARKAWGS 222
                 9********************************************************************777776...6788999*********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAPKRSFRDD PPSASSSSSE REVEEETQEE EEEEEPHKED EEEEEEEEEE EEEEEEDQEE  60
KKKSQAQSSD SETESEPDRD RAVKQSGKPV PAKPAERKKR RAEEIVSNGE AAPKWVKTES  120
NSEAEKKQFF QRKWSESDEM EVMKGLVEFS ERKKDNPVYD YNDFYELIKR KIQSFVTKPQ  180
LRSKIRNLKK KFRSCEKRAK KGAKLSPLEV NFLELARKAW GSAEKPAKEK TAAEKPVNEK  240
TAAARRLEGQ EGTSVSALSH WLLKGIEDLG GGGSINEEFI RKWTGFVDER KRVELDQRWR  300
RLQEEELQLV AKRARLTHEL TALIRQAYNS NVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.17e-17GeBP family protein