PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91215.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 447aa MW: 50807.4 Da PI: 6.771

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.5	1.4e-19	215	311	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +k+l++sdv+++gr+v+pk+ aee+ +++ +e+++++++d s ++W++++++ ++ks++yvl+ ++ +Fvk n+L+ gD+v+++ ++++ +++++ OWM91215.1 215 KKELKNSDVGSLGRIVIPKRDAEENlpSLNAKEGIQVVIKDiNSHQEWSLRYKFwsNNKSRMYVLE-NTGDFVKKNELEIGDTVILY--EDKSHNFYFS 310 6899*********************8888999***6677***99888888889999.******************..4455555776 PP E CS B3 96 v 96 + OWM91215.1 311 I 311 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEKSYFPFPN TTNEEPYTAS SQPQPHPHSS SSSSYDQHHH PYSSLSSSTS TFPYHHPAPF 60 PSPYLPMVPP FAVHPPTSQP PTEPFWVGPK VQHPVSYSGQ PVHRFSGIAL SQPNYTNFNT 120 STMSPVDQER MAAADAWTTK VARTKRKIAR QRSLNLNRSS EDLAAMFPHF YYDGVDDATT 180 VLSMHETMAS SAYKKPIDPY NFISPDNKRL RLILKKELKN SDVGSLGRIV IPKRDAEENL 240 PSLNAKEGIQ VVIKDINSHQ EWSLRYKFWS NNKSRMYVLE NTGDFVKKNE LEIGDTVILY 300 EDKSHNFYFS IKKAEKPLQE LLQKPHQNPN RHYSSFQIAP TTSPSHEEED AALALLIEQL 360 GHREQQEVTL HLMDFPPPSS QYMAPANEPQ AAFNCFTKQD NNNQRSDNNT GIHSNDFYSS 420 FDSLNGINPC TFPFLDQWSG ARGENQQ

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEKSYFPFPN TTNEEPYTAS SQPQPHPHSS SSSSYDQHHH PYSSLSSSTS TFPYHHPAPF  60
PSPYLPMVPP FAVHPPTSQP PTEPFWVGPK VQHPVSYSGQ PVHRFSGIAL SQPNYTNFNT  120
STMSPVDQER MAAADAWTTK VARTKRKIAR QRSLNLNRSS EDLAAMFPHF YYDGVDDATT  180
VLSMHETMAS SAYKKPIDPY NFISPDNKRL RLILKKELKN SDVGSLGRIV IPKRDAEENL  240
PSLNAKEGIQ VVIKDINSHQ EWSLRYKFWS NNKSRMYVLE NTGDFVKKNE LEIGDTVILY  300
EDKSHNFYFS IKKAEKPLQE LLQKPHQNPN RHYSSFQIAP TTSPSHEEED AALALLIEQL  360
GHREQQEVTL HLMDFPPPSS QYMAPANEPQ AAFNCFTKQD NNNQRSDNNT GIHSNDFYSS  420
FDSLNGINPC TFPFLDQWSG ARGENQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	1e-40	B3 family protein