PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM91165.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WOX

Protein Properties

Length: 394aa MW: 42142.7 Da PI: 7.2075

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM91165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.3e-17	49	109	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F + +p ++e++++ ++l ++ +++V++WFqNr+ + k+ OWM91165.1 49 KPRWNPKPEQIRILEAIFDSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 109 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.7	3.8e-36	48	110	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k OWM91165.1 48 PKPRWNPKPEQIRILEAIFDSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 110 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MASSNRHWPS MFKSKPHQWQ HEVNSSLMSS GCHRSQYSSG CEERTPEPKP RWNPKPEQIR 60 ILEAIFDSGM VNPPRDEIRK IRAQLQEYGQ VGDANVFYWF QNRKSRSKHK LRHLQNSNKQ 120 QNRQSAAAAA ASASPTSSAT NASAAPTSSS SSSDNKSSPK DNGAGAPNKS SASTIFSLGP 180 SSMIDASNNS PSYSSSQQAP YFPTQEEILT EPFLFPSSHG FQLSEPQVPF HGQPMVGHYG 240 SLLLSEIVAH GGASKKVKMN PNANATSSAH TAVPSTATAN ATVTVPFLSS LDQVHGAGVQ 300 LTGEPRPAGD SPVTAGSGGG VPKLTVFIND VPFELPAEPF SVQAAFGDDA VLINAAGQPI 360 LTDEWGLTLQ PLQHGAFYYL LDIVTGEPTN YPSV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MASSNRHWPS MFKSKPHQWQ HEVNSSLMSS GCHRSQYSSG CEERTPEPKP RWNPKPEQIR  60
ILEAIFDSGM VNPPRDEIRK IRAQLQEYGQ VGDANVFYWF QNRKSRSKHK LRHLQNSNKQ  120
QNRQSAAAAA ASASPTSSAT NASAAPTSSS SSSDNKSSPK DNGAGAPNKS SASTIFSLGP  180
SSMIDASNNS PSYSSSQQAP YFPTQEEILT EPFLFPSSHG FQLSEPQVPF HGQPMVGHYG  240
SLLLSEIVAH GGASKKVKMN PNANATSSAH TAVPSTATAN ATVTVPFLSS LDQVHGAGVQ  300
LTGEPRPAGD SPVTAGSGGG VPKLTVFIND VPFELPAEPF SVQAAFGDDA VLINAAGQPI  360
LTDEWGLTLQ PLQHGAFYYL LDIVTGEPTN YPSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	7e-67	WOX family protein