PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM90662.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 272aa MW: 28116.2 Da PI: 10.1455

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM90662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.7	2e-38	34	126	2	95
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa 95 a kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ +ss ++ s++++ +s++ OWM90662.1 34 ALKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISSSTRGGG-GSASASLSSSH 126 679*************************************************************999997773222222222.22222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MSNSEGGSNA AVTNGAIIDP QRPPTAHPAN GALALKKPPS KDRHSKVDGR GRRIRMPIIC 60 AARVFQLTRE LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSTISSS TRGGGGSASA 120 SLSSSHHHHL DHKPLLGPTP FILGKRIRPD DDHDNGNGNS NSSSGKDEVS IVGPTLGAMV 180 GPGGTPGGFW ALPARPDFWS FAAAAAAAAA PPPELVSVSQ QQQTSLFLQQ QQQAMGEASA 240 ARVGNYLPGH LNLLASLSGG HGSSGRREDD AR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-47	TCP family protein