PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90494.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 307aa    MW: 33195.8 Da    PI: 8.315
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.25e-402787262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                +++ lkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s
  OWM90494.1 27 HDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKAS 87
                7899******************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDSSSSPSGD MLACSRPLME RRLRPQHDQP LKCPRCESTH TKFCYYNNYS LSQPRYFCKT  60
CRRYWTKGGT LRNIPVGGGC RKNKKASSSK KPSEHHNSPM MIQNPGSSSS SSGRNPTDLH  120
LSFPHDIPQL SSHFGSLLGN GSFGAANGFL EGKFGPGPGP IDFMESKLEA IVGNNPSRNN  180
YDFMGNNTAS EQVQLGVLSS SGYGDLSGNG FSPNFHGLCS PYGIISSSAI DVPNNVGASF  240
IENNYQSAMD VKPNPKLLSL EWQDQNCSDA GKNNVNTTFG GYSFNGLGSS WTGMINEYSS  300
PATNPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.13e-43Dof family protein