PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM90466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 444aa MW: 49588.9 Da PI: 8.3283 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 53.9 | 3e-17 | 59 | 113 | 12 | 71 |
E2F_TDP 12 kflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +fl+l+ ++ + ++l++++++L v +rRRiYDi+NVLe+++++++++kn++ wkg OWM90466.1 59 SFLSLYDREGIESICLDDATSKL---GV--ERRRIYDIVNVLESIGMLARTAKNKYAWKG 113 69999999888************...**..****************************98 PP | |||||||
2 | E2F_TDP | 62.6 | 5.7e-20 | 184 | 297 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse........................................dvknkrRRiYDilNVLealnli 59 r+eksL+llt++f+kl+ +++ ++ +l+e+a+ L+ + k+RR+YDi+NVL+++nli OWM90466.1 184 RREKSLGLLTKNFVKLFVCTDVNMHSLDEAASLLLGDgrnsailksnififalsiawnleefenfglltelflikypAA--KVRRLYDIANVLSSMNLI 280 689***********************************************************************97645..89**************** PP E2F_TDP 60 ek.....kekneirwkg 71 ek ++k+++rw g OWM90466.1 281 EKthtsdTRKPAFRWLG 297 ******99*******87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 444 aa Download sequence |
MEERATTLTS NSAAKSLQRH YSYSRKQKSL GLLCTKYSPP PLSVSPNSFT SQFELVWCSF 60 LSLYDREGIE SICLDDATSK LGVERRRIYD IVNVLESIGM LARTAKNKYA WKGFGGIPRA 120 LEELMAEEGP TKGSLNGSVD GSCVKELEDD DDDESLSNPN TGSQNDKSDA SMPSVSASSR 180 ADSRREKSLG LLTKNFVKLF VCTDVNMHSL DEAASLLLGD GRNSAILKSN IFIFALSIAW 240 NLEEFENFGL LTELFLIKYP AAKVRRLYDI ANVLSSMNLI EKTHTSDTRK PAFRWLGPKP 300 KSDVGTASVL EIKDPKKRMF GTDITNTIHD GSKGSSSVKR DSNCMAKVQK LYKQESLVGE 360 SNGSKLKESR QIQHYQFGPF APVDASKGDA PESRKVKQPQ DWDSFASKFR PHYQNQALRD 420 LFSHYIEAWN TWFYEVAEKK PTGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-96 | E2F/DP family protein |