PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90410.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Nin-like
Protein Properties Length: 326aa    MW: 37126.7 Da    PI: 5.0037
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK80.12.3e-25180227552
      RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +s e++s+yF++pi+ AAkeL+++lT+LK++CR++GI+RWPhRk+ sl
  OWM90410.1 180 LSRETISEYFYMPITRAAKELNIGLTLLKKRCRELGIRRWPHRKLMSL 227
                 899******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MCNDRLVPKE EVGDEDPFYT FPIHSLDMSG NYNNGFTEYD WNSVFPFDQP QQQQPAGITE  60
NAQLHGAMTS WDPLVALSAS AEFNPLSTRP PPLEHGRFLV QESSQPPEAI NIWDSAVPQA  120
SITSFKAGYE QGILMRYSGD INGEATAVVE DNQVTTLVER RTTRRCTRSE DRNGSRSELL  180
SRETISEYFY MPITRAAKEL NIGLTLLKKR CRELGIRRWP HRKLMSLQTL IKNVKEMEGG  240
EGNEGKMKEV VTILEREKKL MEELPDLDLE DKTKRLRQAC FKANYKKRKL VAITYSGSSN  300
SSSRAREGEE DEDEMRALSS FDNDLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.15e-31Nin-like family protein