PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM89717.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 25840.6 Da PI: 8.4971 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.1e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++lvd + + G +W+ ++ g+ R++k+c++rw +yl OWM89717.1 14 RGPWTIEEDQKLVDFILKNGIQCWRVVPTLAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg T+ E++++++++ +lG++ W++Ia++++ gRt++++k++w++ OWM89717.1 67 RGVLTEAEEDQIIELHSRLGNR-WSKIAAHLP-GRTDNEIKNHWNT 110 6788******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MGRQPCCEKV GLRRGPWTIE EDQKLVDFIL KNGIQCWRVV PTLAGLLRCG KSCRLRWINY 60 LRPDLKRGVL TEAEEDQIIE LHSRLGNRWS KIAAHLPGRT DNEIKNHWNT RIKKRLKLLG 120 LDPQTHEPII HDERPSRKEN AWNADISVKD QQPIPGKEVC RTLKTGANPD PKDTCCSKSL 180 TLKMDESMTQ ENCFPNLIET AESTFSWDSL SELEQIFQYR SHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 9e-79 | MYB family protein |