PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89595.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 275aa    MW: 29340.6 Da    PI: 6.3704
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.2e-11158205455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  OWM89595.1 158 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 205
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDPPALINGG SFPGASAPPY NLAEIWPFQL NGGHPTPFGQ GNGIGPFGIG SGPNHEALGA  60
GPASLEQRVS LGSGSDSGGG RKRRELEDEL AKGGASTSNG AGLSDCDAKR LKPSGDDNGG  120
DGNKPAEEEP GTAKSQPQEP PKQDYIHVRA RRGQATDSHS LAERARREKI SERMKILQDL  180
VPGCNKVIGK ALVLDEIINY IQSLQRQVEF LSMKLEAVNS RLTPGLEVFP SKDFGQQTFD  240
ASGIPFLPQS TREYPRGSSP DWLHMQVGGS FDRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-83bHLH family protein