PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89570.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 435aa MW: 48775.7 Da PI: 8.3175

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.1e-14	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l ++v+ +G+++W +Ia ++ ++ qc+ rw +yl OWM89570.1 25 TWTPEEDDILREVVRIHGTENWPAIALKFK-DKSTRQCRRRWSTYL 69 6**************************9.*********9997 PP
2	Myb_DNA-binding	47.1	5.6e-15	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg W++eEd+ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + OWM89570.1 75 RGGWSPEEDKLLCEAQKVYGNR-WTEIAKVVS-GRTDNAVKNRFTT 118 789*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MPDSKKKVAG SSESDSKKKE RHIVTWTPEE DDILREVVRI HGTENWPAIA LKFKDKSTRQ 60 CRRRWSTYLN SDFKRGGWSP EEDKLLCEAQ KVYGNRWTEI AKVVSGRTDN AVKNRFTTLC 120 KKRAKYEALA KENKASCVNP NGKRVISCGT LNMQGATGVA DPNKKSRGTN VRDVSLEDDQ 180 QPRPPFAVLA QNLHHKGEDN DRHNDDQGVK TGETFLRTDD PKFAALMRRA ELLSSLAQRV 240 KAESTEQSLE NAEKVLQDII NQSKDGDIFK YCNAGIDFQL HIIKDMMGDF TSSNEGSQTS 300 WRQPDLCEDS PATSEYSTGS TYLIKTTHDK TAETEAKEKS IEDRFHIKHT QGMLRSCDEQ 360 INTEAVVSVP PSKEFGSPLQ VTPVFRSIAA GIPSPKFSES ERNFLMKTLG MESLSPSPST 420 NINPPSCKRS LLQSL

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MPDSKKKVAG SSESDSKKKE RHIVTWTPEE DDILREVVRI HGTENWPAIA LKFKDKSTRQ  60
CRRRWSTYLN SDFKRGGWSP EEDKLLCEAQ KVYGNRWTEI AKVVSGRTDN AVKNRFTTLC  120
KKRAKYEALA KENKASCVNP NGKRVISCGT LNMQGATGVA DPNKKSRGTN VRDVSLEDDQ  180
QPRPPFAVLA QNLHHKGEDN DRHNDDQGVK TGETFLRTDD PKFAALMRRA ELLSSLAQRV  240
KAESTEQSLE NAEKVLQDII NQSKDGDIFK YCNAGIDFQL HIIKDMMGDF TSSNEGSQTS  300
WRQPDLCEDS PATSEYSTGS TYLIKTTHDK TAETEAKEKS IEDRFHIKHT QGMLRSCDEQ  360
INTEAVVSVP PSKEFGSPLQ VTPVFRSIAA GIPSPKFSES ERNFLMKTLG MESLSPSPST  420
NINPPSCKRS LLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-144	MYB family protein