PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89429.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 1265aa MW: 138999 Da PI: 6.898

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.8	1.9e-08	298	346	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq OWM89429.1 298 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 346 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1265 aa Download sequence
MVNSFGPPAL WDQPTSVQNM GYCDSSLQNN LSSMNPLGGP KVGLGPSSLR SDVSWNPPVS 60 MLREGLFLPN APGTLPESLS QFPADSGFIE RAARFSCFSG GGFSDMVNPF GGVEGIGVPP 120 HGGVRMPVSM QEEAFPIDLV RLLPPQRNSI NTVEASKDAL LSSVPENCEV SQLKREGRSE 180 DLVRSTDEVP KQVVGGSGND SEEPEFSGGG GQDGKEEKGS GSKKRKRNGP IAGFDAKGDG 240 QPSEDVKDTS ETQQKIDQSP NSASGKAAGK NNKQGSQASD PPKEEYIHVR ARRGQATNSH 300 SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN 360 PRLDFNIERL LAKDILHSRA GPSSTLGFFP NMPMAYPPPI HPPPAGLIQA GLNGIGSPDS 420 LRRTLHNQIN PENAGGFKES AQLPNVWEDE LHNVVQMGFN GGSALPSDQD NTDVAMMRTL 480 GCKLGQSQTL GCRIKSFPPS SFEGRSSTLD SSCTVPPAFD ETCGMSSDYF SSLLKFCCDS 540 RNLGQAKKLH CRIIKTLTSP ETILSNNLVN AYSKLGNLSY ARNVFDQIPQ PNLFSWNAIL 600 SAYSKSGNLA RVQETFNLMS VRDGVSWNCL ISAYAGRGLV ADSVKAYNSM MREGTRNLSR 660 ITFSTMLVLS SNRGCINLGK QVHGHILKFG FSEYVFVGSP LVDMYSKTGL IRDAKQVFDE 720 MSERNLVLHN TMITGLLRCG LVEESKLLFH NMKERDSISW TTMITGFTQN GLDREAIAFF 780 REMGSEGLEI DQFTYGSVLT ACSSILALNE GKQIHAFAMK TSYIGNIFVG SALVDMYCKC 840 KNVIYAGRVF NRMARKNVVS WTAMLVGYGQ NGFSEDAVRI FRDMQRNGIE PDDFTLGSVI 900 SSCANLASLE EGSQFHCLAL VSGYVSCLTV SNALITLYGK CGNIEDSSRL FDEMSCRDEV 960 SWTALVSGYA QFGKANETID LFEKMLASGF KPDGVTFIGV LSACSRAGLV DKGKEYFESM 1020 MKEHHITPVT DHYTCMIDLL SRSGRLEEAK NFINNMPFPP DAIGWSTLLS SCRFRGNLEI 1080 GKWAADSLME LEPQSPASYV LLTSIYAATG KWDDVAQLRK GMRERGVKKE PGFSWIKYKN 1140 KVHIFSADDQ SSPYLDQIYT ELERLNSRII SEGYVPDMSS ILHDVEDSEK IKMLNHHSEK 1200 LAIAFGLIFI PSNFPIRVVK NLRVCGDCHS ATKYISKVTG REILVRDAIR FHLFKDGSCS 1260 CGDFW

Sequence ? help Back to Top

Protein Sequence Length: 1265 aa Download sequence

MVNSFGPPAL WDQPTSVQNM GYCDSSLQNN LSSMNPLGGP KVGLGPSSLR SDVSWNPPVS  60
MLREGLFLPN APGTLPESLS QFPADSGFIE RAARFSCFSG GGFSDMVNPF GGVEGIGVPP  120
HGGVRMPVSM QEEAFPIDLV RLLPPQRNSI NTVEASKDAL LSSVPENCEV SQLKREGRSE  180
DLVRSTDEVP KQVVGGSGND SEEPEFSGGG GQDGKEEKGS GSKKRKRNGP IAGFDAKGDG  240
QPSEDVKDTS ETQQKIDQSP NSASGKAAGK NNKQGSQASD PPKEEYIHVR ARRGQATNSH  300
SLAERVRREK ISERMKFLQD LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLATVN  360
PRLDFNIERL LAKDILHSRA GPSSTLGFFP NMPMAYPPPI HPPPAGLIQA GLNGIGSPDS  420
LRRTLHNQIN PENAGGFKES AQLPNVWEDE LHNVVQMGFN GGSALPSDQD NTDVAMMRTL  480
GCKLGQSQTL GCRIKSFPPS SFEGRSSTLD SSCTVPPAFD ETCGMSSDYF SSLLKFCCDS  540
RNLGQAKKLH CRIIKTLTSP ETILSNNLVN AYSKLGNLSY ARNVFDQIPQ PNLFSWNAIL  600
SAYSKSGNLA RVQETFNLMS VRDGVSWNCL ISAYAGRGLV ADSVKAYNSM MREGTRNLSR  660
ITFSTMLVLS SNRGCINLGK QVHGHILKFG FSEYVFVGSP LVDMYSKTGL IRDAKQVFDE  720
MSERNLVLHN TMITGLLRCG LVEESKLLFH NMKERDSISW TTMITGFTQN GLDREAIAFF  780
REMGSEGLEI DQFTYGSVLT ACSSILALNE GKQIHAFAMK TSYIGNIFVG SALVDMYCKC  840
KNVIYAGRVF NRMARKNVVS WTAMLVGYGQ NGFSEDAVRI FRDMQRNGIE PDDFTLGSVI  900
SSCANLASLE EGSQFHCLAL VSGYVSCLTV SNALITLYGK CGNIEDSSRL FDEMSCRDEV  960
SWTALVSGYA QFGKANETID LFEKMLASGF KPDGVTFIGV LSACSRAGLV DKGKEYFESM  1020
MKEHHITPVT DHYTCMIDLL SRSGRLEEAK NFINNMPFPP DAIGWSTLLS SCRFRGNLEI  1080
GKWAADSLME LEPQSPASYV LLTSIYAATG KWDDVAQLRK GMRERGVKKE PGFSWIKYKN  1140
KVHIFSADDQ SSPYLDQIYT ELERLNSRII SEGYVPDMSS ILHDVEDSEK IKMLNHHSEK  1200
LAIAFGLIFI PSNFPIRVVK NLRVCGDCHS ATKYISKVTG REILVRDAIR FHLFKDGSCS  1260
CGDFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	4e-97	bHLH family protein