PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM89319.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 267aa MW: 30423.8 Da PI: 5.28 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 6.6e-16 | 10 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v ++G ++W+ Ia+ g ++Rt+k+c++rw +yl OWM89319.1 10 KGPWTEQEDLQLVCFVGLFGDRRWDFIAKVSGlkvagdNNRTGKSCRLRWVNYL 63 79**************************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.6e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++ OWM89319.1 69 RGKMTPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MKTVQEETRK GPWTEQEDLQ LVCFVGLFGD RRWDFIAKVS GLKVAGDNNR TGKSCRLRWV 60 NYLHPDLKRG KMTPQEERLV LELHSKWGNR WSRIARKLPG RTDNEIKNYW RTHMRKKAQE 120 RKRAMSASSS SSSSSNSSSA SGNPTVESIQ STETGEESFY DTGGITTVST EQKSEELEKG 180 EEGYSMDDIW KEIALSEDKN MTSVYDGCYS EEGCNFSCPP MASPSWGYSS NALWHMDDEG 240 NKLFPFVNDQ LFSCYDIVRE SLLTAEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 3e-90 | MYB family protein |