PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 456aa MW: 50889.6 Da PI: 8.8037 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 44 | 91 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+d++k++G g+W+t ++ g++R++k+c++rw +yl OWM88692.1 44 KGPWTADEDQKLIDYIKKHGHGRWRTLPKNAGLKRCGKSCRLRWTNYL 91 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.8 | 1e-17 | 97 | 141 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ OWM88692.1 97 RGRFSSEEEEAIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 141 89********************.*********.************97 PP | |||||||
3 | Myb_DNA-binding | 26.8 | 1.2e-08 | 188 | 210 | 24 | 47 |
HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47 W++Ia++++ gRt++++k++w+++ OWM88692.1 188 WSAIAARLP-GRTDNEIKNYWNTH 210 *********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence |
MVNNSKNVGK DALHHHRGHH QRQAGTSPSC ASSEKTASND GLKKGPWTAD EDQKLIDYIK 60 KHGHGRWRTL PKNAGLKRCG KSCRLRWTNY LRPDIKRGRF SSEEEEAIIQ LHSILGNKWS 120 AIAARLPGRT DNEIKNYWNT HIKKRLLRMG IDPVTHAPRL DVLELSSILS SSLYNYTHYP 180 NIPNLLGWSA IAARLPGRTD NEIKNYWNTH IKKRLLRMGI DPVTHAPRLD VLELSSILSS 240 SLYNYTHYPN IPNLLGLIGS SSLNQNKDFL EIAKQLVISQ NISREGPPNY IEPPLAHHLQ 300 NQNQDQHLSA NPISIGDQYY SLPSSSWDNS YGGFGFDQNL MNSSLLGADQ GSFDIGNDSN 360 GYVGLVQSLI DPNSNFQDEN VNIKEVQRLG VAGSSHSSPM SNNSGCTFNS SSTTTRTRTY 420 GASGTCNNED ERDTYGSNSS MYDIINHVSS YVNSIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 3e-78 | MYB family protein |