PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 311aa MW: 34844.3 Da PI: 7.6098 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63 | 5.8e-20 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+l ++v ++G g+W++ +r g++R++k+c++rw +yl OWM88269.1 15 RGPWTPEEDEKLSEYVSKHGHGSWRALPRLAGLNRCGKSCRLRWMNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.3 | 3.6e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ l+v+++ G++ W++Ia++++ gRt++++k++w+++l OWM88269.1 68 RGNFSEEEERLIVHLHSIVGNK-WAKIASHLP-GRTDNEIKNHWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MGRPPCRAEE NGVKRGPWTP EEDEKLSEYV SKHGHGSWRA LPRLAGLNRC GKSCRLRWMN 60 YLRPDIKRGN FSEEEERLIV HLHSIVGNKW AKIASHLPGR TDNEIKNHWN THLRKKLLQK 120 GIDPKTHKPI LANQIPNDLL VNLIIAQSLQ GPNNNDNLGS SSVMSSTPWE QIIATELTKI 180 QLAHNLLQFI SPNTTPTMDC SANHSTLLGP YSNTANYSSA SQNNIMPGSS VNPNPVNLHQ 240 IMNSWATSEP GSLELPAMWA PWSFKESTEC TRTTGSRSLT KSSNASIDPF EDLEKLMDDD 300 TCASFLRDFL E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17785.1 | 8e-79 | MYB family protein |