PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87810.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 381aa MW: 43442.4 Da PI: 4.5652

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.8	2.7e-36	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+yei++d+++++++sws+ +nsf+v+d+++f+ ++LpkyFkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F +g+++ll++i+ OWM87810.1 44 FLTKTYEIVDDPTTDHIVSWSTGNNSFIVWDSQTFSMTLLPKYFKHNNFSSFIRQLNTYGFRKVDPER---------WEFANEGFLRGQRHLLKNIR 131 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+ks OWM87810.1 132 RRKS 135 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSSLGARIKE ELPGASSPAG AASGFGIPTP QPMEGLHDAG PPPFLTKTYE IVDDPTTDHI 60 VSWSTGNNSF IVWDSQTFSM TLLPKYFKHN NFSSFIRQLN TYGFRKVDPE RWEFANEGFL 120 RGQRHLLKNI RRRKSLQPQA ASSQQSLDPC VEVGIFGLDQ EVDRLNRDKQ VLMIELIKLR 180 QQQQTSRAYL QQMERRLHRT EQKHRQMMSF LARAMKNPEF MQQLVQQKDR RKELEEAINK 240 KRRRPIDQGQ YSDSICNAID LADDDEEGIN PTLIKVEPEN LGDVSEFGLD EIDTLAIDVQ 300 GVGGTSQRDI NVEENYLGEL IEEEHEHHQE GRVDKEFDDG FWEGLLNEGN EELGLLGIEG 360 EDEEDVNVLA EQLGYLASSP K

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSSLGARIKE ELPGASSPAG AASGFGIPTP QPMEGLHDAG PPPFLTKTYE IVDDPTTDHI  60
VSWSTGNNSF IVWDSQTFSM TLLPKYFKHN NFSSFIRQLN TYGFRKVDPE RWEFANEGFL  120
RGQRHLLKNI RRRKSLQPQA ASSQQSLDPC VEVGIFGLDQ EVDRLNRDKQ VLMIELIKLR  180
QQQQTSRAYL QQMERRLHRT EQKHRQMMSF LARAMKNPEF MQQLVQQKDR RKELEEAINK  240
KRRRPIDQGQ YSDSICNAID LADDDEEGIN PTLIKVEPEN LGDVSEFGLD EIDTLAIDVQ  300
GVGGTSQRDI NVEENYLGEL IEEEHEHHQE GRVDKEFDDG FWEGLLNEGN EELGLLGIEG  360
EDEEDVNVLA EQLGYLASSP K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	244	RRKELEEAINKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-121	HSF family protein