PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87582.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 1523aa MW: 170204 Da PI: 9.1413

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.6	1.2e-07	983	1024	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE +++ + ++G++ +++Ia + ++t +c+++++ OWM87582.1 983 PWTAEERAMFLEKFGKYGKD-FRKIATFLK-HKTTADCVEFYYR 1024 8***************99.****9.********985 PP
2	Myb_DNA-binding	29.4	1.9e-09	1146	1187	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT E ++ +av +G++ ++ I++++ +R+ qc+ +++k OWM87582.1 1146 DWTDVEKSIFMRAVSHYGKD-FAMISQYVK-TRSKDQCRAFYNK 1187 5***************99.****9.*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1523 aa Download sequence
MPQETSPWDR RELKRERSEP VARWRVSPPY RGGSRSFHRA AESRRHTGHG KQGGWHQYPE 60 ETGHRYAPYR SFSKTIAVRG DGKYSRGYRD NRGLFDRREY RGEHSWETSR RSFSTMPKPY 120 DDGDIMRDQH SKRSATRLSP SQKIEEKRFV DSTEWKDRRW MNSGRLPSRG SGLGHSSGSK 180 RASRIELVEK NVEYESKSVI PRQSSTEDVA DCMYSIGQSE GLTPKKKPRL RWGEGLAKYE 240 KKKVEDPVDT PMDRDIQSNQ STRLDATGRT SGVLGVLESS SPATASSLAL ISLPEPVARW 300 RVSPPYRGGS RSFHRAAESR RHTGHGKQGG WHQYPEETGH RYAPYRSFSK TIAVRGDGKY 360 SRGYRDNRGL FDRREYRGEH SWETSRRSFS TMPKPYDDGD IMRDQHSKRS ATRLSPSQKI 420 EEKRFVDSTE WKDRRWMNSG RLPSRGSGLG HSSGSKRASR IELVEKNVEY ESKSVIPRQS 480 STEDVADCMY SIGQSEGLTP KKKPRLRWGE GLAKYEKKKV EDPVDTPMDR DIQSNQSTRL 540 DATGRTSGVL GVLESSSPAT ASSLALISLP DMEDKLIGTM KMGGQVDGVS ELPVAMSQST 600 HQGFSATSDE LDISSIASGD PLLVQLLQSN DISLDSNLLS TLVDKLVLMK ENVSKVLLTT 660 ESQIDSLENE LKSIVSEHED VCASPISSSF AVKDYFRCSL GEDGVASVVS QPDPVQTVTC 720 ANSCAEELCY VKGTRSDSHV AATFNTAVQD NHMASQDAAQ RTVVEMVKVV SGSESMETSK 780 SLEHVKFLGS AENTLYDLIF SSNKEAANRS SFEVFSDLVL RNHDKLDVAK ISCSPDDSRI 840 REKFTQRKRF LTFKERVLAL KYKTFHYLWQ KDIHALSAMN KLGSQKKLES SSRIRIGGCQ 900 KPRSSIHPCV SSSGIMGQLS KKETIHYISK LVRDSRWRIY REALKMPAFD LDERAEIASR 960 FISYNGLVED PCAVEKERTV INPWTAEERA MFLEKFGKYG KDFRKIATFL KHKTTADCVE 1020 FYYRNHKSDL FQGVKKKLGT RARPQLLPAN TYLVTPGKLR NREVNAANLL SEASLGASQD 1080 QAEAGGGKLD WESCHRRSFL RPCSNSRSSH IDAPDDEREA VAADVLTQIR SSVVHVKNCG 1140 EKDLSDWTDV EKSIFMRAVS HYGKDFAMIS QYVKTRSKDQ CRAFYNKARK CLKLDKMLPG 1200 PAGKCLNCDA NEGSDGPDGP QVVKIAGAIC KNDSVTGKSQ DLPVSVKMET ADAVDCGLPT 1260 DLKETADGSC LMGSRVCEEK CSRVSVKGHD TVPEMKLSKH VSDQSLGASE RWLAHLPADS 1320 SPCSVFSLGS ESKDRSLVET DQVEKPLLAI LTDSASFQCV KMKTLNSNNQ PENGGQWSHD 1380 TKGKVQNLQE SENSSHGSDF KLFGRRILTC TPQNYPDLSI HEEDKKRVLK ATQSLTGSSN 1440 KGRNSSLLKF DPDDHTSLEN VSIGSYGYWD GTRIRTVPSL PNSAFLLAKY PAAFSKNPLQ 1500 ELANSSEFNI NNCSGPSIIP AWM

Sequence ? help Back to Top

Protein Sequence Length: 1523 aa Download sequence

MPQETSPWDR RELKRERSEP VARWRVSPPY RGGSRSFHRA AESRRHTGHG KQGGWHQYPE  60
ETGHRYAPYR SFSKTIAVRG DGKYSRGYRD NRGLFDRREY RGEHSWETSR RSFSTMPKPY  120
DDGDIMRDQH SKRSATRLSP SQKIEEKRFV DSTEWKDRRW MNSGRLPSRG SGLGHSSGSK  180
RASRIELVEK NVEYESKSVI PRQSSTEDVA DCMYSIGQSE GLTPKKKPRL RWGEGLAKYE  240
KKKVEDPVDT PMDRDIQSNQ STRLDATGRT SGVLGVLESS SPATASSLAL ISLPEPVARW  300
RVSPPYRGGS RSFHRAAESR RHTGHGKQGG WHQYPEETGH RYAPYRSFSK TIAVRGDGKY  360
SRGYRDNRGL FDRREYRGEH SWETSRRSFS TMPKPYDDGD IMRDQHSKRS ATRLSPSQKI  420
EEKRFVDSTE WKDRRWMNSG RLPSRGSGLG HSSGSKRASR IELVEKNVEY ESKSVIPRQS  480
STEDVADCMY SIGQSEGLTP KKKPRLRWGE GLAKYEKKKV EDPVDTPMDR DIQSNQSTRL  540
DATGRTSGVL GVLESSSPAT ASSLALISLP DMEDKLIGTM KMGGQVDGVS ELPVAMSQST  600
HQGFSATSDE LDISSIASGD PLLVQLLQSN DISLDSNLLS TLVDKLVLMK ENVSKVLLTT  660
ESQIDSLENE LKSIVSEHED VCASPISSSF AVKDYFRCSL GEDGVASVVS QPDPVQTVTC  720
ANSCAEELCY VKGTRSDSHV AATFNTAVQD NHMASQDAAQ RTVVEMVKVV SGSESMETSK  780
SLEHVKFLGS AENTLYDLIF SSNKEAANRS SFEVFSDLVL RNHDKLDVAK ISCSPDDSRI  840
REKFTQRKRF LTFKERVLAL KYKTFHYLWQ KDIHALSAMN KLGSQKKLES SSRIRIGGCQ  900
KPRSSIHPCV SSSGIMGQLS KKETIHYISK LVRDSRWRIY REALKMPAFD LDERAEIASR  960
FISYNGLVED PCAVEKERTV INPWTAEERA MFLEKFGKYG KDFRKIATFL KHKTTADCVE  1020
FYYRNHKSDL FQGVKKKLGT RARPQLLPAN TYLVTPGKLR NREVNAANLL SEASLGASQD  1080
QAEAGGGKLD WESCHRRSFL RPCSNSRSSH IDAPDDEREA VAADVLTQIR SSVVHVKNCG  1140
EKDLSDWTDV EKSIFMRAVS HYGKDFAMIS QYVKTRSKDQ CRAFYNKARK CLKLDKMLPG  1200
PAGKCLNCDA NEGSDGPDGP QVVKIAGAIC KNDSVTGKSQ DLPVSVKMET ADAVDCGLPT  1260
DLKETADGSC LMGSRVCEEK CSRVSVKGHD TVPEMKLSKH VSDQSLGASE RWLAHLPADS  1320
SPCSVFSLGS ESKDRSLVET DQVEKPLLAI LTDSASFQCV KMKTLNSNNQ PENGGQWSHD  1380
TKGKVQNLQE SENSSHGSDF KLFGRRILTC TPQNYPDLSI HEEDKKRVLK ATQSLTGSSN  1440
KGRNSSLLKF DPDDHTSLEN VSIGSYGYWD GTRIRTVPSL PNSAFLLAKY PAAFSKNPLQ  1500
ELANSSEFNI NNCSGPSIIP AWM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	243	KKKPRLRWGEGLAKYEKKK
2	501	519	KKKPRLRWGEGLAKYEKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-78	MYB family protein